G19526


Basic Information

Item Value
gene id G19526
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 20519457 ~ 20524897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU22718
tttcagttagttttgtctgattagtttcacctgtttcttgtttgggtTTTGTTTTGGGCTATTTAAACCCGGTAGGCCGGCtggcttttgtgcgggcttgtttttctgttcatggtgtgtgGATTATTGTGAATTCCGTTTTTCCGGACAGTTTCGTCCTGTTTGTTGGACTGGGTATTTATGCGCCCTTGTGTGTGGCGTGACCGTTACTCTGTTCTTGGAATAAAGATCCACGTTTtgaactaccctgctctctgcgcctgactcttccacccactactcctagaagcctTTAcaggatgtcggtgggcggagccaggagggtcgtcagcgacatgggacacacctgggcccgggtgtgtcccaggataaatacacctcttccccattcattgaggagactctctccatgcagacaaaCTGTtagattttggttgtggcatttttgttgcctgtttgtttgtttgcttgcttgcttgcttgcttgggcacctttcaacacccctcattatcacatttatgcatgcaaccactcacttacactactgattactgactacacacaccattgttattTGTA

Function

NR:

description
tetratricopeptide repeat protein 7B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22718 True 580 lncRNA 0.51 2 20519457 20524897

Neighbor

gene id symbol gene type direction distance location
LOC110506010 polr2e coding upstream 198389 20318748 ~ 20321068 (+)
LOC110505394 LOC106573573 coding upstream 318891 20197087 ~ 20200566 (+)
LOC110532018 LOC106573567 coding upstream 425510 19977844 ~ 20093947 (+)
LOC110504002 LOC106573565 coding upstream 613246 19901680 ~ 19906211 (+)
LOC110503939 LOC106573564 coding upstream 653838 19863734 ~ 19865619 (+)
LOC110506309 hpln4 coding downstream 3388 20528285 ~ 20565572 (+)
borcs8 borcs8 coding downstream 398083 20922980 ~ 20931337 (+)
mef2b mef2b coding downstream 425210 20950107 ~ 20983313 (+)
LOC118945307 NA coding downstream 493310 21003934 ~ 21089252 (+)
LOC110507137 LOC106573592 coding downstream 609380 21134277 ~ 21141851 (+)
G19496 NA non-coding upstream 2639 20465290 ~ 20516818 (+)
G19434 LOC106573581 non-coding upstream 144374 20374648 ~ 20375083 (+)
G19412 LOC106573580 non-coding upstream 181607 20336994 ~ 20337850 (+)
G19400 NA non-coding upstream 209559 20309425 ~ 20309898 (+)
G19399 NA non-coding upstream 210074 20309171 ~ 20309383 (+)
G19622 NA non-coding downstream 170203 20695100 ~ 20695539 (+)
G19676 NA non-coding downstream 277962 20802859 ~ 20803085 (+)
G19680 NA non-coding downstream 283607 20808504 ~ 20808805 (+)
G19744 NA non-coding downstream 362319 20887216 ~ 20887681 (+)
G19747 LOC106604997 non-coding downstream 367385 20892282 ~ 20892517 (+)
G19380 LOC100194703 other upstream 242562 20276590 ~ 20276895 (+)
G19359 NA other upstream 276582 20242645 ~ 20242875 (+)
G19083 NA other upstream 603625 19915586 ~ 19915832 (+)
G20773 NA other downstream 1042648 21567545 ~ 21568188 (+)
G23109 NA other downstream 3013499 23538396 ~ 23538863 (+)
G23135 NA other downstream 3049695 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 3348124 23872914 ~ 23905175 (+)
ccl4 ccl4 other downstream 3979758 24504638 ~ 24506125 (+)

Expression


Co-expression Network