G33109


Basic Information

Item Value
gene id G33109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 31617121 ~ 31682005 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU37520
ctctagacccaaactgttatagacctatatccatcatgccctgcctttctaaaacccaagttaacaaacagatcaccgactatTTCTAATccaaccgtaccttctccgctatgcaatctggtttccgagctggtcatgggtgcacctcaggcacactcaaggtcctaaaagataacataaccgccatcgacaaaagacagtactgtgcagccgtcttcatcaacctggccaaggctttcgactgtcaatcaccacattcttatcggcagactcaatagccttggcttctcaaatgactgcctcgcctggttcaccaactacttctcagatagagttcaatgtgtcaaatcggagggcctgttgtctggacctctggcagtctctatgggggtgccacagggttcaattctcgggccaactcacttcctgtatatatcaatgatgtcgctcttgctgctggtgattctctgatccacctctatgcagatgacaccattctgtaaacatctggcccttctttggacacagtgCTAACATACCTCCAAAtcagcttcaatgtcatacaacactccttccgtggcctccaactgcttttaaatgcttgtaaaactaagtgcatgctcttcaaccgattgctgcccgcaccctcccgtccgacaagcatcactactctggacggttctgacctagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctccttccagactcacattaagcatctccaatccaaaattaaatctagaattgtcttattacgcaacaaagcctccttcactcatgctgccaaacatacccccgcactctgcgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37520 True 855 lncRNA 0.38 2 31617121 31682005

Neighbor

gene id symbol gene type direction distance location
LOC110521155 LOC106573493 coding downstream 7946 31601388 ~ 31609175 (-)
tspan3a tspan3 coding downstream 34786 31566374 ~ 31582335 (-)
LOC110521059 scaper coding downstream 67833 31461269 ~ 31549288 (-)
LOC110521048 LOC100194695 coding downstream 172157 31426123 ~ 31444964 (-)
LOC110520932 LOC106573529 coding downstream 484221 31131151 ~ 31132900 (-)
LOC110532195 NA coding upstream 109374 31791379 ~ 31794152 (-)
LOC110521239 LOC106573487 coding upstream 126907 31808912 ~ 31842003 (-)
LOC110521251 LOC106573484 coding upstream 307295 31989300 ~ 31997662 (-)
LOC110521435 NA coding upstream 533498 32215495 ~ 32217278 (-)
LOC110521366 LOC106573474 coding upstream 536753 32218758 ~ 32270230 (-)
G33104 NA non-coding downstream 4057 31611942 ~ 31613064 (-)
G33023 NA non-coding downstream 16638 31578444 ~ 31600483 (-)
G33021 NA non-coding downstream 53858 31562716 ~ 31563263 (-)
G33025 NA non-coding downstream 57339 31557866 ~ 31559782 (-)
G33212 NA non-coding upstream 95160 31777165 ~ 31782159 (-)
G33246 NA non-coding upstream 165686 31847691 ~ 31847899 (-)
G33252 NA non-coding upstream 169332 31851337 ~ 31851612 (-)
G33386 NA non-coding upstream 305354 31984771 ~ 31989249 (-)
G33437 NA non-coding upstream 324619 32006624 ~ 32006831 (-)
G29906 mef2a other downstream 2336421 29280276 ~ 29280700 (-)
G29355 NA other downstream 2912765 28703887 ~ 28704356 (-)
G28870 NA other downstream 3550816 28057443 ~ 28066305 (-)
G35075 LOC106573452 other upstream 1425114 33107119 ~ 33108497 (-)
G35299 NA other upstream 1760363 33442368 ~ 33452413 (-)
G35628 NA other upstream 2185553 33867558 ~ 33868045 (-)
G36141 NA other upstream 2595695 34277700 ~ 34362736 (-)

Expression


Co-expression Network