G35968


Basic Information

Item Value
gene id G35968
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 33954501 ~ 33955468 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU40661
ttcagttttttggcAATTTTTCACATGGACTAGCCTTCATTCCTtagaacaataatagactgatgagtttcagaagaaagtgctttgtttctggccattttgagcctgtaatcgaacccacaaatgctgatgctccagatactcaactagactaaagaatgccagttttattgcttctttaatcagaaaaacagttttcagctgtgctaacataattgcacgaaggttttctaatgatcaattagccttttaaaattataaacttcggttagctaacacaacgtgctattggaacactggagtgatggttgctgttgatgggcctctgtacgcctatgtagatattccataaaaatctgccgtttccagctacaatagtcatttacaacattaaccatgtctacattgtatttctgatcaatttgatgttattttaatggaacaaaaaaaaaacaaggacatttctaactgACCCCATACGTTTGAATGGTCATATATTTTATTAAAATGATGGTGAACCCACTGCAGTTCCCCCATGACCCCGCTTAGGTTCATGACCCTGACTTTGAATACCATTTCCCTAGCCCTTACCCCGTAGTTACTCAGGCCCCCCTCAACACCAAGATGTGACAGTTTGCACTGCACTTATCTACAAATGACATGTTTGAGCACTGTAGGTATAGTGGGGATTTGTCTACACTTTTACATATTCTCGAAGAACGTCCTACTACAGTAACTCTTAACCTGACCTACTTCCCAGTTCTATTATAATAAATTAGATACTTGCTTAGTATACTTTTGGCAGAATAAGTAATTGTTTCGCAATTGCACCAGAAATGTCATGTAATATATGATATAGCTTCTGCACTGTGAATGCATTGCGTAGGTTACGTGGTACTCTGAATACCTCAACAGCACCATTCCATGGTGACAATCTCTATTATGTTAAATTAATAGTATAGTGCAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40661 True 968 lncRNA 0.44 1 33954501 33955468

Neighbor

gene id symbol gene type direction distance location
rbm28 rbm28 coding downstream 566 33944834 ~ 33953935 (-)
lrrc4.2 LOC106573446 coding downstream 224535 33724849 ~ 33729966 (-)
grm3 LOC106573453 coding downstream 1029902 32867631 ~ 32924599 (-)
LOC118964459 NA coding downstream 1109769 32839445 ~ 32844732 (-)
LOC110521494 LOC106573457 coding downstream 1170522 32761197 ~ 32783979 (-)
LOC118966666 LOC106573442 coding upstream 3860 33959328 ~ 33962096 (-)
LOC110521614 LOC106573524 coding upstream 27909 33983377 ~ 34002282 (-)
si:ch1073-390k14.1 LOC106573523 coding upstream 53812 34009280 ~ 34018443 (-)
LOC110521650 LOC106573438 coding upstream 69717 34025185 ~ 34040439 (-)
iqsec3b LOC106573430 coding upstream 244887 34200355 ~ 34245388 (-)
G35966 NA non-coding downstream 11529 33942726 ~ 33942972 (-)
G35964 NA non-coding downstream 15451 33938838 ~ 33939050 (-)
G35961 NA non-coding downstream 18033 33936214 ~ 33936468 (-)
G35960 NA non-coding downstream 18340 33935889 ~ 33936161 (-)
G35958 NA non-coding downstream 21242 33933021 ~ 33933259 (-)
G35979 NA non-coding upstream 12589 33968057 ~ 33968349 (-)
G35969 LOC106573441 non-coding upstream 13722 33969190 ~ 33970767 (-)
G35982 NA non-coding upstream 18038 33973506 ~ 33973779 (-)
G35986 LOC106573441 non-coding upstream 18807 33974275 ~ 34068011 (-)
G35988 NA non-coding upstream 90844 34046312 ~ 34047304 (-)
G35628 NA other downstream 86456 33867558 ~ 33868045 (-)
G35299 NA other downstream 502088 33442368 ~ 33452413 (-)
G35075 LOC106573452 other downstream 846004 33107119 ~ 33108497 (-)
G33386 NA other downstream 1968351 31984771 ~ 31989249 (-)
LOC110521048 LOC100194695 other downstream 2509552 31426123 ~ 31444964 (-)
G36141 NA other upstream 322232 34277700 ~ 34362736 (-)
G36196 NA other upstream 386094 34341562 ~ 34381232 (-)
G37310 LOC106573403 other upstream 1318241 35273709 ~ 35278005 (-)
G37907 NA other upstream 1485450 35440918 ~ 35441328 (-)
G37976 NA other upstream 1627824 35583292 ~ 35583608 (-)

Expression


Co-expression Network