G35988


Basic Information

Item Value
gene id G35988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 34046312 ~ 34047304 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU40681
TAAAACTAAGTCTTATTACCACTGTTCACTGGACAATGGTTCTTTACTGAAGTTATACGGAGGATCGATTGACAtgtcactcttcatggacacacagctggGTACAGGAGACACTGgtctctcctgctcctctttcTCGCCTGAGAGAATATTTTTCGAAAAactgtccccctcctctctctctgcagagagactcattttagaggttGTAATTCCCTTCTCACGGGAAGACAAATACTACTGTCCTCTGACCTAGATCAGccctgtgaacacacacacacacCACTGAGATGGGTTGCTCGGTTTGAGAATGCTGCTGTAGGCTGTAGCTTCTTTGTTTGACTGCTTAAAGGGCAGAATGTAGGGAGGGCAAGCCAGGGCAGGCACAGTATTTGACTTCCGCCTTATGGGAATTTGGTAGCTAGATGAGCTACATTTGCTTGGTAGGTTGTTGCTatgcctctttcctctctctgtgatCTTTATGGGTGCTTTTACGCTGTGTGGTGCATGGAAACA

Function

NR:

description
NACHT, LRR and PYD domains-containing protein 12-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40681 True 519 lncRNA 0.43 2 34046312 34047304

Neighbor

gene id symbol gene type direction distance location
LOC110521650 LOC106573438 coding downstream 5873 34025185 ~ 34040439 (-)
si:ch1073-390k14.1 LOC106573523 coding downstream 27869 34009280 ~ 34018443 (-)
LOC110521614 LOC106573524 coding downstream 44030 33983377 ~ 34002282 (-)
LOC118966666 LOC106573442 coding downstream 84216 33959328 ~ 33962096 (-)
rbm28 rbm28 coding downstream 92377 33944834 ~ 33953935 (-)
iqsec3b LOC106573430 coding upstream 153051 34200355 ~ 34245388 (-)
LOC118964492 NA coding upstream 249383 34296687 ~ 34302605 (-)
LOC110521742 LOC105022204 coding upstream 412124 34459428 ~ 34466711 (-)
LOC110521764 LOC106573421 coding upstream 426664 34473968 ~ 34490179 (-)
cpt1 cpt1 coding upstream 600081 34647385 ~ 34660153 (-)
G35982 NA non-coding downstream 72533 33973506 ~ 33973779 (-)
G35969 LOC106573441 non-coding downstream 75545 33969190 ~ 33970767 (-)
G35979 NA non-coding downstream 77963 33968057 ~ 33968349 (-)
G35968 NA non-coding downstream 90844 33954501 ~ 33955468 (-)
G35966 NA non-coding downstream 103340 33942726 ~ 33942972 (-)
G36028 NA non-coding upstream 36601 34083905 ~ 34084325 (-)
G36030 NA non-coding upstream 38784 34086088 ~ 34086337 (-)
G36045 NA non-coding upstream 67516 34114820 ~ 34115042 (-)
G36050 NA non-coding upstream 77953 34125257 ~ 34125468 (-)
G36055 NA non-coding upstream 90451 34137755 ~ 34139621 (-)
G35628 NA other downstream 178267 33867558 ~ 33868045 (-)
G35299 NA other downstream 593899 33442368 ~ 33452413 (-)
G35075 LOC106573452 other downstream 937815 33107119 ~ 33108497 (-)
G33386 NA other downstream 2060162 31984771 ~ 31989249 (-)
LOC110521048 LOC100194695 other downstream 2601363 31426123 ~ 31444964 (-)
G36141 NA other upstream 230396 34277700 ~ 34362736 (-)
G36196 NA other upstream 294258 34341562 ~ 34381232 (-)
G37310 LOC106573403 other upstream 1226405 35273709 ~ 35278005 (-)
G37907 NA other upstream 1393614 35440918 ~ 35441328 (-)
G37976 NA other upstream 1535988 35583292 ~ 35583608 (-)

Expression


Co-expression Network