XLOC_020146 (cela1.3)


Basic Information

Item Value
gene id XLOC_020146
gene name cela1.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 7480465 ~ 7483755 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040113
GAGACGTTTAGAGACCAAACGTCTAGAAAGACTAGAAACATGCTGAGAATCCTGCTGTTGAGTGTGCTGGCGACATTAGTGCTGGCTGAGCCCAGATATTTGGAAGATATAGACATTGAGGGAAGGGTTGTTGGTGGAGAGGTGGCAAAACCCAACTCCTGGCCTTGGCAGATCTCTCTCCAGTATCTGTCTGGAAGCAGCTACTATCATACCTGTGGTGGATCTCTGATCAGACCAGGATGGGTGATGACCGCTGCCCACTGCGTTGACAGTCCTAGAACTTGGCGCGTTGTCTTGGGTGACCATGACATCTACAACCATGAGGGTCGCGAGCAGTATATAAGTGTCAGCCGTGCTCATATCCACCCCAACTGGAACAGCAACAGTTTGTCTTCTGGATATGACATTGCTCTTCTGGAACTGTCCAGCGATGCTTCTCTGAACTCATATGTGCAGCTGGCCGCACTGCCACCCTCTGGACAGGTTCTCCCCAACAACAACCCTTGTTACATCAGTGGCTGGGGCCGCACGCAGACTGGTGGGTCACTCTCTGCCGAGCTGAAACAGGCATATCTGCCCGTGGTGGACCACGATACTTGTTCCCGCAGCGATTGGTGGGGAAGCACTGTGAAGAACACCATGATTTGCGGTGGCGATGGCACTCTTGCAGGATGTCATggtgacTCTGGCGGTCCTCTGAACTGTCAGGTCAGCGGTCAGTATGTCGTCCATGGTGTGACCAGCTTTGTGTCATCAGCAGGTTGCAATACCAACAAGAGACCAACAGTCTTCTCTCGTGTCTCTGCCTACATCAGCTGGATTAATGATgtCATTGGGAAATGAGATAATTGAAAGACAAACATCATGTTTAAATTTCAACATTTGCATTTGCCAGAAACACAATAAACATCATCTAACGTTGAA

Function

symbol description
cela1.3 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space. Is expressed in several structures, including cardiovascular system; digestive system; hematopoietic system; presumptive blood; and ventral mesoderm. Orthologous to human CELA1 (chymotrypsin like elastase 1).

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005615 extracellular space cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040801-12 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space. Is expressed in several structures, including cardiovascular system; digestive system; hematopoietic system; presumptive blood; and ventral mesoderm. Orthologous to human CELA1 (chymotrypsin like elastase 1).

Ensembl:

ensembl_id ENSDARG00000043173

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040113 True 924 mRNA 0.50 8 7480465 7483755

Neighbor

gene id symbol gene type direction distance location
XLOC_020145 cela1.2 coding upstream 4113 7472420 ~ 7476352 (+)
XLOC_020144 cela1.1 coding upstream 10127 7462997 ~ 7470338 (+)
XLOC_020143 NA coding upstream 28045 7452173 ~ 7452420 (+)
XLOC_020142 cela1.6 coding upstream 33074 7439186 ~ 7447391 (+)
XLOC_020141 NA coding upstream 412676 7033248 ~ 7067789 (+)
XLOC_020147 cela1.4 coding downstream 3112 7486867 ~ 7492548 (+)
XLOC_020148 cela1.5 coding downstream 13564 7497319 ~ 7508894 (+)
XLOC_020149 NA coding downstream 62069 7545824 ~ 7556620 (+)
XLOC_020150 AL929276.1 coding downstream 171516 7655271 ~ 7662596 (+)
XLOC_020151 NA coding downstream 192597 7676352 ~ 7972344 (+)
XLOC_020140 NA non-coding upstream 452949 7025462 ~ 7027516 (+)
XLOC_020139 CU929149.1 non-coding upstream 530941 6943403 ~ 6949524 (+)
XLOC_020136 NA non-coding upstream 599187 6879741 ~ 6881278 (+)
XLOC_020152 NA non-coding downstream 193476 7677231 ~ 7972869 (+)
XLOC_020155 NA non-coding downstream 287162 7770917 ~ 7801971 (+)
XLOC_020157 NA non-coding downstream 437781 7921536 ~ 7929272 (+)

Expression


Co-expression Network