XLOC_020149


Basic Information

Item Value
gene id XLOC_020149
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 7545824 ~ 7556620 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042044
GAAAATCCCATCTGGACCATCAGATGTAGAGATCTGCTCATCTTTGATTTCAGCTATGGGAAACCTCTTATAGTTAAATCTCCATTCTATCTGATCATGATTGTGTATTTCTGCAGAAGTCTTTAAAACAGCTGTCCTTCCCTGGATGAATGTCACTGTCTCTGCTTCATGTCACAGAAcCATGACTGCAACAGTGAATCTTTTCTCATGGGCTCCTGAGCTGCTATTATTGATCTTCAGATAATAAGCCCCAGCATGTTCAAGTTTGATGTTTTTGATGGTCAAGGATCCAGTTTTTTTGTCCAGATCCAGTGTGTCTTTGAAGATCCCATGATGACCATCAgataaaaaaatctctccatctTTGATTTCAGCTATGGGAGACTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042044 True 387 lncRNA 0.40 2 7545824 7556620

Neighbor

gene id symbol gene type direction distance location
XLOC_020148 cela1.5 coding upstream 36930 7497319 ~ 7508894 (+)
XLOC_020147 cela1.4 coding upstream 53276 7486867 ~ 7492548 (+)
XLOC_020146 cela1.3 coding upstream 62069 7480465 ~ 7483755 (+)
XLOC_020145 cela1.2 coding upstream 69472 7472420 ~ 7476352 (+)
XLOC_020144 cela1.1 coding upstream 75486 7462997 ~ 7470338 (+)
XLOC_020150 AL929276.1 coding downstream 98651 7655271 ~ 7662596 (+)
XLOC_020151 NA coding downstream 119732 7676352 ~ 7972344 (+)
XLOC_020152 NA coding downstream 120611 7677231 ~ 7972869 (+)
XLOC_020153 si:ch73-44m9.5 coding downstream 182346 7738966 ~ 7739549 (+)
XLOC_020154 cela1.5 coding downstream 185591 7742211 ~ 7754391 (+)
XLOC_020143 NA non-coding upstream 93404 7452173 ~ 7452420 (+)
XLOC_020141 NA non-coding upstream 478035 7033248 ~ 7067789 (+)
XLOC_020140 NA non-coding upstream 518308 7025462 ~ 7027516 (+)
XLOC_020139 CU929149.1 non-coding upstream 596300 6943403 ~ 6949524 (+)
XLOC_020136 NA non-coding upstream 664546 6879741 ~ 6881278 (+)
XLOC_020155 NA non-coding downstream 214297 7770917 ~ 7801971 (+)
XLOC_020157 NA non-coding downstream 364916 7921536 ~ 7929272 (+)
XLOC_020159 CABZ01077220.2 non-coding downstream 708913 8265533 ~ 8265649 (+)

Expression


Co-expression Network