XLOC_020161



Basic Information


Item Value
gene id XLOC_020161
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8297633 ~ 8314868 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042049
ataaagggactaagccgacaagaaaatgaatgaataaatgaaattctGCTTAATTTgtatttcaaagaaaaaaaagacgatCCAAGATTAGAATATTGAAATCAAAGTTCTCACCTTTCACAATAACTCTGAAGGTCTGTGATTTTGTCCCTGCACTGCTGATACTCTCTACTTCGTATTCACCGTAGTGTCTGTGTCTGATGCTCCAGATTGTGCAAAATCCATTTTGATCCACGGTTAGTGTGTCACCAAACATGACAAGCTTATCATCAGTATATTCAACTCCACCAGTTTCTTTATTGACTGATGCTATACGGGTTCTATTAACTTTCCAGTCAATTAGACCATTTTTCTGCACTTCAATAAAGTTTGTCTTTAGAGTTAAAGAATCTCCCTCAAACACGTTCATTTCCATGGCCTCAACACCGAAAttacctgtttaaaataaagaCAGCCATGTCCTCTTTCAGATAGTGATTTTGAACTGCATATATCCCTCCAGCCTGCAAAAGTGACTCTGAAATTGATTCCGGATTCagaaaagttttgattctg

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042049 True 555 lncRNA 0.37 2 8297633 8314868

Neighbor


gene id symbol gene type direction distance location
XLOC_020160 CABZ01077220.1 coding upstream 23254 8272393 ~ 8274379 (+)
XLOC_020159 CABZ01077220.2 coding upstream 31984 8265533 ~ 8265649 (+)
XLOC_020158 CABZ01034698.1 coding upstream 278719 8012532 ~ 8018914 (+)
XLOC_020157 NA coding upstream 368361 7921536 ~ 7929272 (+)
XLOC_020155 NA coding upstream 495662 7770917 ~ 7801971 (+)
XLOC_020163 CABZ01077217.2 coding downstream 13509 8328377 ~ 8331669 (+)
XLOC_020164 NA coding downstream 24337 8339205 ~ 8356509 (+)
XLOC_020165 si:dkey-19a16.11 coding downstream 51037 8365905 ~ 8369853 (+)
XLOC_020166 NA coding downstream 60898 8375766 ~ 8495359 (+)
XLOC_020167 CABZ01061501.1 coding downstream 92839 8407707 ~ 8440399 (+)
XLOC_020152 NA non-coding upstream 324764 7677231 ~ 7972869 (+)
XLOC_020151 NA non-coding upstream 325289 7676352 ~ 7972344 (+)
XLOC_020171 NA non-coding downstream 255237 8570105 ~ 8574907 (+)
XLOC_020174 NA non-coding downstream 306430 8621298 ~ 8761630 (+)
XLOC_020176 CR450686.2 non-coding downstream 380228 8695096 ~ 8699930 (+)

Expression



Co-expression Network