G57690


Basic Information

Item Value
gene id G57690
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 52462189 ~ 52462598 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU64115
TTCATGGATAGCTAACGTTGTGGGGTTGTTGATGAGGAGGAAGAAACAAGGGGAGGGTCATttgtgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagcggactggccacccctcatagcctggttcctctctaggtttcctcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttcgggttttaggctgggtttctgtacagcactttgagatttcagctgatgtaagaagggctatataaatacatttgatttgatttgagggacgagagaatgagagagcgagagaacatcaattgacataccaattaggatctggctaaaaatacttgaaatagttatagaaccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64115 True 410 lncRNA 0.45 1 52462189 52462598

Neighbor

gene id symbol gene type direction distance location
LOC110524629 LOC106573088 coding upstream 544205 51900323 ~ 51917984 (+)
LOC110524623 LOC106573089 coding upstream 567272 51888400 ~ 51894917 (+)
LOC110524604 LOC106573091 coding upstream 610414 51801997 ~ 51852291 (+)
trnap-agg NA coding upstream 831286 51630832 ~ 51630903 (+)
trnap-ugg-2 NA coding upstream 831950 51630168 ~ 51630239 (+)
LOC110524688 LOC106573082 coding downstream 57908 52520506 ~ 52524718 (+)
LOC110524698 LOC106573080 coding downstream 66180 52528778 ~ 52551209 (+)
LOC110524804 NA coding downstream 236082 52698680 ~ 52702647 (+)
LOC110524813 LOC106573076 coding downstream 244952 52707550 ~ 52722838 (+)
LOC110524844 LOC106573071 coding downstream 420272 52882870 ~ 52889860 (+)
G57675 NA non-coding upstream 10520 52451416 ~ 52451669 (+)
G57416 LOC106573083 non-coding upstream 122589 52333931 ~ 52339600 (+)
G57364 NA non-coding upstream 202483 52241814 ~ 52259706 (+)
G57337 NA non-coding upstream 253303 52202704 ~ 52208886 (+)
G57312 NA non-coding upstream 300350 52161552 ~ 52161839 (+)
G57695 NA non-coding downstream 2705 52465303 ~ 52465565 (+)
G57723 NA non-coding downstream 20836 52483434 ~ 52483650 (+)
G57724 NA non-coding downstream 21208 52483806 ~ 52484224 (+)
G57728 NA non-coding downstream 25068 52487666 ~ 52487866 (+)
G57729 LOC100194703 non-coding downstream 26092 52488690 ~ 52489074 (+)
LOC110524575 fgf3 other upstream 1011254 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 2378193 50037523 ~ 50184257 (+)
G53181 NA other upstream 3568277 48893497 ~ 48893912 (+)
G52324 NA other upstream 4078932 48380542 ~ 48383257 (+)
G52080 NA other upstream 4437231 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 1203617 53632830 ~ 53705421 (+)
G59031 NA other downstream 1525542 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 1582251 54044813 ~ 54089850 (+)
G59963 NA other downstream 2258590 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 3442910 55905508 ~ 55923376 (+)

Expression


Co-expression Network