G57738


Basic Information

Item Value
gene id G57738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 52494434 ~ 52494970 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU64164
gaatatgtggacatctataagtacctaggtgtctggctagactgcaaactctccttccagactcatatcaaacatctccaatcgaaaatcaaatcaagagtcggctttctattccgcaacaaagcctccttcactcacgccgccaaacttaccctagtaaaactgactatcctaccgatcctcgacttcggcgatgtcatctacaaaattgcttccaacactctactcagcaaactggatgcagtttatcacagtgccatccgttttgtcactaaagcaccttataccacccaccactgcgacttgtatgctctagtcggctggccctcgctacatattcgtcgccagacccactggctccaggtcatctacaagtccatgctaggtaaagctccgccttatctcagttcactggtcacgatggcaacacccatccgtagcacgccctccagcaggtgtatctcactgatcatccctaaagccaacacctcatttggccgcctttcgttccagttctctgctgcctgtgactggaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64164 True 537 lncRNA 0.46 1 52494434 52494970

Neighbor

gene id symbol gene type direction distance location
LOC110524629 LOC106573088 coding upstream 576450 51900323 ~ 51917984 (+)
LOC110524623 LOC106573089 coding upstream 599517 51888400 ~ 51894917 (+)
LOC110524604 LOC106573091 coding upstream 642659 51801997 ~ 51852291 (+)
trnap-agg NA coding upstream 863531 51630832 ~ 51630903 (+)
trnap-ugg-2 NA coding upstream 864195 51630168 ~ 51630239 (+)
LOC110524688 LOC106573082 coding downstream 25536 52520506 ~ 52524718 (+)
LOC110524698 LOC106573080 coding downstream 33808 52528778 ~ 52551209 (+)
LOC110524804 NA coding downstream 203710 52698680 ~ 52702647 (+)
LOC110524813 LOC106573076 coding downstream 212580 52707550 ~ 52722838 (+)
LOC110524844 LOC106573071 coding downstream 387900 52882870 ~ 52889860 (+)
G57736 NA non-coding upstream 1459 52492738 ~ 52492975 (+)
G57729 LOC100194703 non-coding upstream 5360 52488690 ~ 52489074 (+)
G57728 NA non-coding upstream 6568 52487666 ~ 52487866 (+)
G57724 NA non-coding upstream 10210 52483806 ~ 52484224 (+)
G57723 NA non-coding upstream 10784 52483434 ~ 52483650 (+)
G57740 NA non-coding downstream 168 52495138 ~ 52495382 (+)
G57769 NA non-coding downstream 58330 52553300 ~ 52555377 (+)
G57758 NA non-coding downstream 70052 52565022 ~ 52592365 (+)
G57802 NA non-coding downstream 129419 52624389 ~ 52631323 (+)
LOC110524575 fgf3 other upstream 1043499 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 2410438 50037523 ~ 50184257 (+)
G53181 NA other upstream 3600522 48893497 ~ 48893912 (+)
G52324 NA other upstream 4111177 48380542 ~ 48383257 (+)
G52080 NA other upstream 4469476 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 1171245 53632830 ~ 53705421 (+)
G59031 NA other downstream 1493170 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 1549879 54044813 ~ 54089850 (+)
G59963 NA other downstream 2226218 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 3410538 55905508 ~ 55923376 (+)

Expression


Co-expression Network