XLOC_020184



Basic Information


Item Value
gene id XLOC_020184
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8927365 ~ 8953552 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00041881
GGAAAAGGGCAGCGATTCTTGAGCATGCGCAGTTGCGCACATCAATGTAGAAACCAAATCATCCCAACTGCAGCTACAATCAACAGAGATCCAGCAGCAGCACCCGCACCAGCAGAGATCAGAGAGTCTGAAGTTtcTTGGCCAAAGACCATTCGTCCCTGTGGAAAGCACATTTACACACTGTGTCATATATGCCCAATGTACTGTAGCCCTATGTATCattcaccaaaaaaaataatgcatttcagAGATCATTTTAATGGTTGaaattctatgtgaagctgcagTGCCATCATCCAAAAATGTTTAGCTATATTGGCAGATGTGagaaagtttt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00041881 True 337 lncRNA 0.42 3 8927365 8953552

Neighbor


gene id symbol gene type direction distance location
XLOC_020183 NA coding upstream 33224 8886048 ~ 8894141 (+)
XLOC_020182 NA coding upstream 72831 8838425 ~ 8854534 (+)
XLOC_020181 NA coding upstream 89642 8821497 ~ 8837723 (+)
XLOC_020180 si:dkey-182g1.10 coding upstream 117869 8772363 ~ 8809496 (+)
XLOC_020179 si:dkey-182g1.2 coding upstream 157008 8753092 ~ 8770357 (+)
XLOC_020185 si:ch211-213a13.1 coding downstream 26403 8979955 ~ 8996337 (+)
XLOC_020186 rnh1 coding downstream 49538 9003090 ~ 9009188 (+)
XLOC_020187 si:ch211-213a13.2 coding downstream 55944 9009496 ~ 9057108 (+)
XLOC_020188 si:ch211-213a13.2 coding downstream 107147 9060699 ~ 9096248 (+)
XLOC_020189 NA coding downstream 112534 9066086 ~ 9066418 (+)
XLOC_020174 NA non-coding upstream 165735 8621298 ~ 8761630 (+)
XLOC_020176 CR450686.2 non-coding upstream 227435 8695096 ~ 8699930 (+)
XLOC_020194 NA non-coding downstream 369205 9322757 ~ 9323817 (+)
XLOC_020195 NA non-coding downstream 387903 9341455 ~ 9343000 (+)
XLOC_020196 BX927329.2 non-coding downstream 397820 9351372 ~ 9359403 (+)
XLOC_020197 NA non-coding downstream 406347 9359899 ~ 9383484 (+)

Expression



Co-expression Network