G59181


Basic Information

Item Value
gene id G59181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53986539 ~ 53987790 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65796
GTAAATGGAATACATATTGGCTTACAGCAAGAACTATGCTGGGTGCCGCAGTAAAAGTATTGTAGggaatactcagtagggtctgtagaatgTATACATGTTGTCATTCCATGGGGCTCTGAATAATACGGAGTGTTGCTGGCCTTTTACTCCACCTATTCCATTGCCTCCCGAATGACATCACATGTACACTTACTACACTACAAAAAACCCTCTAGCCAAACAACAGTGCAGGGCCTTCTCACTGAATTAAAGGGCAACTACACTCAAAATCTTAGATTTTCCCAGATCTCAAAAGTTAacccctgatgtggtttaagcattgttgtgaacACAGAAAATCCAATTTTGTTGTTTGTCTTTTTAAAAAGTGTGAAAAAAATGGGTAAACCTGAAAAAATGGGGTAATAAGAAACCTAGAAATACAAAActaagaaaaaaaatacaaaaaatataaacagatTTTTAAAAGGCCCTACCAACATTTTCTGCACTTTAGAGTGTTTCATCCTGCAGAACAGCATTTTTTGGGAAGTTTAGGTCAGGTCAAATATTGACTATGCACCCAAGAGGGGAAAAGGTTGTGCCATCCTAGAAATGTTTTTGGGAAAtctaatataatacataaaatgTAGCAGACactatccaaagtgacttagtcaTGTGTGAGTACATTTTTGTGTATGGgtgtcccgggaatcaaacccaataTTCTGGCGTTGCAATGCTCTACCAAGATGCATGACAGTGTTATAAATGCTTTATAAAACctcaatttaatataatttataaGGCCTTTATTAATCAGTGCTTAtgccaccctttataaagcacaggTTTATGTCATATTTGACATAGTGGGTTATGGGTTATAGTCGGTTATACATTTGACATTGGTggttatgtcacacagttatgcTACATTTAagaaccctttataaagcatgacatatcGTTGTAGATGCTGTGTTTTTTTCTCCATATCCCACTCcccatgagacaccctcagagagtgggatatccaaaaaaacacatttccaattcacacatgcgtaTAATTCAAACGTGTACATGTGTGAACTAGGACATATGTAAGCATCCGTATTATTATTTCCATTCACCTCAATTTGGCAGGACAAAAAGCAATCACCAAAATAACAATACTGTAAATTATTGGATGATGTCCTCGTTTTTCCTGTAATGCTTGAGACCATAGTTCCAGTTAATAAACAAAGACTGCTTTGAATTACCT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU65796 True 1252 lncRNA 0.37 1 53986539 53987790

Neighbor

gene id symbol gene type direction distance location
LOC118964352 NA coding downstream 112303 53872120 ~ 53874236 (-)
LOC110525263 LOC106581842 coding downstream 118449 53853860 ~ 53868090 (-)
LOC118964340 NA coding downstream 144797 53840583 ~ 53841742 (-)
LOC118964896 LOC106581842 coding downstream 149951 53822057 ~ 53836588 (-)
LOC118964895 LOC106581842 coding downstream 164214 53813985 ~ 53822325 (-)
LOC110525320 snx33 coding upstream 1737 53989527 ~ 54019550 (-)
LOC110525336 pf21a coding upstream 125349 54113139 ~ 54223986 (-)
LOC110525355 LOC106573031 coding upstream 320260 54308050 ~ 54354027 (-)
LOC110525376 LOC106573030 coding upstream 385321 54373111 ~ 54382667 (-)
nat10 nat10 coding upstream 476617 54464407 ~ 54503021 (-)
G59189 NA non-coding downstream 1715 53984637 ~ 53984824 (-)
G59193 NA non-coding downstream 3265 53982902 ~ 53983274 (-)
G59199 NA non-coding downstream 10429 53975826 ~ 53976110 (-)
G59198 NA non-coding downstream 11456 53974869 ~ 53975083 (-)
G59197 LOC101154678 non-coding downstream 11676 53974643 ~ 53974863 (-)
G59185 NA non-coding upstream 191 53987981 ~ 53988486 (-)
G59180 NA non-coding upstream 61158 54048948 ~ 54106163 (-)
G59220 NA non-coding upstream 65989 54053779 ~ 54112156 (-)
G59626 NA non-coding upstream 130862 54118652 ~ 54118876 (-)
G58958 LOC106581842 other downstream 189525 53791830 ~ 53797014 (-)
LOC110525178 LOC106581842 other downstream 223643 53761612 ~ 53774544 (-)
G58842 NA other downstream 397769 53588422 ~ 53588770 (-)
G58718 LOC100194703 other downstream 560223 53425964 ~ 53426316 (-)
LOC110525078 LOC105021811 other downstream 648152 53334724 ~ 53338484 (-)
G59978 NA other upstream 741341 54729131 ~ 54737244 (-)
G60516 NA other upstream 1082602 55070392 ~ 55070899 (-)
G60572 NA other upstream 1162451 55150241 ~ 55154258 (-)
G60614 NA other upstream 1205507 55193297 ~ 55193723 (-)
G60624 NA other upstream 1215627 55203417 ~ 55203742 (-)

Expression


Co-expression Network