G59647


Basic Information

Item Value
gene id G59647
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54142366 ~ 54142905 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66283
tattgatgttttatgttaaagacatcctaaagattgattccatatatcgtttgacatgtttctaaaggactgtaacggaacttttcgagtttttgtctggacatagtgcctgcgcctcatgaagatggattactgggctgaacacgctaacaacaagtggctatttggacataaatgatggactttatggaacaaatcagtcatttattgtcgaactgggattcctgggagtgcaaaggtaagtgaatatttatggtgttatttctaacttcgttgactccaaaatggctgatattcctctggctgttttgggttctgagcgtcATCCTCAAATTATGCTTTTTCCAttaagtttttttaaaatctgacacagcggttgcattaaggagaagtttatctttaattctgtgaataacacttgtatcttttatcaatgtttattatgagtatttctgcaaaatcaccggatgttttggaatcaaaacattactgcacgtaacgcgccaatgtaaactgagatttttggatataaatatgcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66283 True 540 lncRNA 0.36 1 54142366 54142905

Neighbor

gene id symbol gene type direction distance location
LOC110525320 snx33 coding downstream 122816 53989527 ~ 54019550 (-)
LOC118964352 NA coding downstream 268130 53872120 ~ 53874236 (-)
LOC110525263 LOC106581842 coding downstream 274276 53853860 ~ 53868090 (-)
LOC118964340 NA coding downstream 300624 53840583 ~ 53841742 (-)
LOC118964896 LOC106581842 coding downstream 305778 53822057 ~ 53836588 (-)
LOC110525355 LOC106573031 coding upstream 165145 54308050 ~ 54354027 (-)
LOC110525376 LOC106573030 coding upstream 230206 54373111 ~ 54382667 (-)
nat10 nat10 coding upstream 321502 54464407 ~ 54503021 (-)
caprin1b LOC100195798 coding upstream 361791 54504696 ~ 54570298 (-)
tspan18b tspan18 coding upstream 450298 54593203 ~ 54716059 (-)
G59644 NA non-coding downstream 5379 54136738 ~ 54136987 (-)
G59639 NA non-coding downstream 9870 54132228 ~ 54132496 (-)
G59638 NA non-coding downstream 10286 54131862 ~ 54132080 (-)
G59636 NA non-coding downstream 11590 54130334 ~ 54130776 (-)
G59630 NA non-coding downstream 19500 54122525 ~ 54122866 (-)
G59650 NA non-coding upstream 2871 54145776 ~ 54146158 (-)
G59655 NA non-coding upstream 10914 54153819 ~ 54154023 (-)
G59656 NA non-coding upstream 11225 54154130 ~ 54154415 (-)
G59660 NA non-coding upstream 15513 54158418 ~ 54158638 (-)
G59622 NA non-coding upstream 16779 54159684 ~ 54159989 (-)
G58958 LOC106581842 other downstream 345352 53791830 ~ 53797014 (-)
LOC110525178 LOC106581842 other downstream 379470 53761612 ~ 53774544 (-)
G58842 NA other downstream 553596 53588422 ~ 53588770 (-)
G58718 LOC100194703 other downstream 716050 53425964 ~ 53426316 (-)
LOC110525078 LOC105021811 other downstream 803979 53334724 ~ 53338484 (-)
G59978 NA other upstream 586226 54729131 ~ 54737244 (-)
G60516 NA other upstream 927487 55070392 ~ 55070899 (-)
G60572 NA other upstream 1007336 55150241 ~ 55154258 (-)
G60614 NA other upstream 1050392 55193297 ~ 55193723 (-)
G60624 NA other upstream 1060512 55203417 ~ 55203742 (-)

Expression


Co-expression Network