G59672


Basic Information

Item Value
gene id G59672
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54181174 ~ 54181630 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66308
GGAAACGAATGATCGTAGACAAGACACcaccttcaacatgcatactgcaaacagacaaactcatcttgtctcctcttatCTTTGGTTTACgcggaagaaaaaaaaacatgcagtaATGCAAACTGGGGGGTGggatcactactggctgtaagCGAACGAGTGATGTGCTCTTGGagcaatactggctgtatccaaggctcagccagtCGTTCGCATAACAACAGAATGCAGCGTAGCACGCGACTGAAGAAAGAAGAGACAACCAATTTgactagttacagcatcagcgcgCCCTCTGGAAAGTCAGTTTGTCAGTTACAGCATCTCGTCCCCTGAACGATAACGAAGAGGTAACgttaggtgagaagcctgaccatGGAGATGGggggtgagaaggtgatgaagcgtacttcatgagctgtaaccgaaaaacaactggcgtttggaaagtttgagg

Function

NR:

description
PREDICTED: bromodomain-containing protein 8-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU66308 True 457 lncRNA 0.52 1 54181174 54181630

Neighbor

gene id symbol gene type direction distance location
LOC110525320 snx33 coding downstream 161624 53989527 ~ 54019550 (-)
LOC118964352 NA coding downstream 306938 53872120 ~ 53874236 (-)
LOC110525263 LOC106581842 coding downstream 313084 53853860 ~ 53868090 (-)
LOC118964340 NA coding downstream 339432 53840583 ~ 53841742 (-)
LOC118964896 LOC106581842 coding downstream 344586 53822057 ~ 53836588 (-)
LOC110525355 LOC106573031 coding upstream 126420 54308050 ~ 54354027 (-)
LOC110525376 LOC106573030 coding upstream 191481 54373111 ~ 54382667 (-)
nat10 nat10 coding upstream 282777 54464407 ~ 54503021 (-)
caprin1b LOC100195798 coding upstream 323066 54504696 ~ 54570298 (-)
tspan18b tspan18 coding upstream 411573 54593203 ~ 54716059 (-)
G59673 NA non-coding downstream 600 54180086 ~ 54180574 (-)
G59664 NA non-coding downstream 12931 54167968 ~ 54168243 (-)
G59662 NA non-coding downstream 15848 54165059 ~ 54165326 (-)
G59622 NA non-coding downstream 21185 54159684 ~ 54159989 (-)
G59660 NA non-coding downstream 22536 54158418 ~ 54158638 (-)
G59625 NA non-coding upstream 3856 54185486 ~ 54186068 (-)
G59720 NA non-coding upstream 73380 54255010 ~ 54259913 (-)
G59721 NA non-coding upstream 97602 54279232 ~ 54297288 (-)
G59794 NA non-coding upstream 212414 54394044 ~ 54458919 (-)
G59956 NA non-coding upstream 517452 54699082 ~ 54705581 (-)
G58958 LOC106581842 other downstream 384160 53791830 ~ 53797014 (-)
LOC110525178 LOC106581842 other downstream 418278 53761612 ~ 53774544 (-)
G58842 NA other downstream 592404 53588422 ~ 53588770 (-)
G58718 LOC100194703 other downstream 754858 53425964 ~ 53426316 (-)
LOC110525078 LOC105021811 other downstream 842787 53334724 ~ 53338484 (-)
G59978 NA other upstream 547501 54729131 ~ 54737244 (-)
G60516 NA other upstream 888762 55070392 ~ 55070899 (-)
G60572 NA other upstream 968611 55150241 ~ 55154258 (-)
G60614 NA other upstream 1011667 55193297 ~ 55193723 (-)
G60624 NA other upstream 1021787 55203417 ~ 55203742 (-)

Expression


Co-expression Network