G61858


Basic Information

Item Value
gene id G61858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 56439774 ~ 56459034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU68675
gaaaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaagaaatctagaaaaaaaatctagaaaagaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaattctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctaggaaaaaaatct
>TU68678
aaaaaaatgtagaaaaaaaatctagaaaaaaaatctagaaaacaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaacaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagataaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaacaatctagaaaaaaaatctaaaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatatagaaaaaaattctagaaaaaattctagaaaaaaaatctagaaaagaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctagaaaaaattctagaaaaaaaatctagaaaaaaaatctagaaaaaaaatctaggaaaaaaatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68675 False 407 lncRNA 0.35 2 56439774 56459034
TU68678 True 635 lncRNA 0.37 2 56457665 56459034

Neighbor

gene id symbol gene type direction distance location
LOC118964919 NA coding upstream 414861 55976159 ~ 56024913 (+)
LOC110525514 LOC106573043 coding upstream 609588 55815371 ~ 55830186 (+)
LOC110525494 LOC106573015 coding upstream 701357 55674086 ~ 55738417 (+)
LOC110532459 NA coding upstream 767930 55562420 ~ 55671844 (+)
LOC110532453 reln coding upstream 916550 55226539 ~ 55523230 (+)
LOC110525521 LOC106576899 coding downstream 92714 56551748 ~ 56596653 (+)
eif3s6ip LOC106576896 coding downstream 435218 56894252 ~ 56904226 (+)
vsir cssa18h10orf54 coding downstream 576574 57035608 ~ 57062851 (+)
LOC110525562 LOC106576893 coding downstream 1163233 57622267 ~ 57765398 (+)
LOC118964920 NA coding downstream 1235464 57694498 ~ 57722025 (+)
G61857 NA non-coding upstream 789 56438680 ~ 56438985 (+)
G61827 NA non-coding upstream 52485 56386165 ~ 56387289 (+)
G61815 NA non-coding upstream 78118 56361357 ~ 56361656 (+)
G61802 NA non-coding upstream 199206 56239908 ~ 56240568 (+)
G61795 NA non-coding upstream 208874 56230532 ~ 56230900 (+)
G61869 NA non-coding downstream 18243 56477277 ~ 56479352 (+)
G61874 NA non-coding downstream 22093 56481127 ~ 56481380 (+)
G61883 NA non-coding downstream 30551 56489585 ~ 56489800 (+)
G61887 NA non-coding downstream 34696 56493730 ~ 56493998 (+)
G61889 NA non-coding downstream 36896 56495930 ~ 56496482 (+)
G61806 NA other upstream 187759 56249888 ~ 56252015 (+)
G61804 NA other upstream 192004 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 409403 56019476 ~ 56030371 (+)
G61202 LOC106573044 other upstream 516398 55905508 ~ 55923376 (+)
G59963 NA other upstream 1718311 54721188 ~ 54721463 (+)
G63958 NA other downstream 1707531 58166565 ~ 58168178 (+)
G63959 fgfr2 other downstream 1762488 58221522 ~ 58223130 (+)
G64292 NA other downstream 2127824 58586858 ~ 58587585 (+)
G64315 NA other downstream 2206300 58665334 ~ 58665906 (+)
G64338 NA other downstream 2240262 58699296 ~ 58700379 (+)

Expression


Co-expression Network