G61889


Basic Information

Item Value
gene id G61889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 56495930 ~ 56496482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU68714
gatgtatacagagaagagagtcggtccaagaattgaaccctgtggcacccccatagagactgccagaggtccggacaacagaccctccgatttgacacactgaactctatcagagaagtagttggtgaaccaggcgaggcaatcatttgagaaaccaaggctgttgagtctgccgatgaggatgtggtgattgacagagtcgaaagccttggccagatcaatgaatacggttgcacagtaatgtttcttatcgatggcggttaagatattgtttaggaccttgagcgtggctgaggtgcacccatgaccagctctgaaaccagattgcatagcagagaaggtatggtgagattcgaaatggtcggtaatctatGGGTCCTATGCAATCTAGATGACAACAGTATTTGTTCAATGTtgcaggcttgtttcttcccaaacgaagaagaattttgagttttggtattgggagtcagagttggaaatcagtctgtgcgCGTGCAACCAACCTTGCTTATTTTGCtattctattgaacatactacattCTTTTTTCCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68714 True 553 lncRNA 0.45 1 56495930 56496482

Neighbor

gene id symbol gene type direction distance location
LOC118964919 NA coding upstream 471017 55976159 ~ 56024913 (+)
LOC110525514 LOC106573043 coding upstream 665744 55815371 ~ 55830186 (+)
LOC110525494 LOC106573015 coding upstream 757513 55674086 ~ 55738417 (+)
LOC110532459 NA coding upstream 824086 55562420 ~ 55671844 (+)
LOC110532453 reln coding upstream 972706 55226539 ~ 55523230 (+)
LOC110525521 LOC106576899 coding downstream 55266 56551748 ~ 56596653 (+)
eif3s6ip LOC106576896 coding downstream 397770 56894252 ~ 56904226 (+)
vsir cssa18h10orf54 coding downstream 539126 57035608 ~ 57062851 (+)
LOC110525562 LOC106576893 coding downstream 1125785 57622267 ~ 57765398 (+)
LOC118964920 NA coding downstream 1198016 57694498 ~ 57722025 (+)
G61887 NA non-coding upstream 1932 56493730 ~ 56493998 (+)
G61883 NA non-coding upstream 6130 56489585 ~ 56489800 (+)
G61874 NA non-coding upstream 14550 56481127 ~ 56481380 (+)
G61869 NA non-coding upstream 16578 56477277 ~ 56479352 (+)
G61858 NA non-coding upstream 36896 56439774 ~ 56459034 (+)
G61891 NA non-coding downstream 531 56497013 ~ 56497276 (+)
G61892 NA non-coding downstream 18036 56514518 ~ 56515150 (+)
G61962 NA non-coding downstream 103504 56599986 ~ 56600305 (+)
G61965 NA non-coding downstream 107193 56603675 ~ 56603929 (+)
G61806 NA other upstream 243915 56249888 ~ 56252015 (+)
G61804 NA other upstream 248160 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 465559 56019476 ~ 56030371 (+)
G61202 LOC106573044 other upstream 572554 55905508 ~ 55923376 (+)
G59963 NA other upstream 1774467 54721188 ~ 54721463 (+)
G63958 NA other downstream 1670083 58166565 ~ 58168178 (+)
G63959 fgfr2 other downstream 1725040 58221522 ~ 58223130 (+)
G64292 NA other downstream 2090376 58586858 ~ 58587585 (+)
G64315 NA other downstream 2168852 58665334 ~ 58665906 (+)
G64338 NA other downstream 2202814 58699296 ~ 58700379 (+)

Expression


Co-expression Network