G64248


Basic Information

Item Value
gene id G64248
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 58585290 ~ 58586694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU71194
TCTTTCATTGACAAGCTATAAGTTAATTATTGATGACTAGAGCTGGAAACACATCAGATGGCTTCCACAACACGTGAACAATATCACCAAAAAAATGGGATTGATAGACCTAACAACTAGAAATGGGCAATGTTTTAGTAAGTAGTGTCAGGTGTGGTCACGGGACATTTCCAAGTGTCCCTAAAACTCTCCAAagtgacatactgtatgtctgtaaaTTAGATAGTTCCAGTGCTATTACATATGTGCAATCCCTAAATGCTATATGTTCAgtataaaaacacaatttctaccatatcaacctcactctaacattgtggtggtgttatGGGGTATCCAGGGTATGTACATTCAAGTGTCCTTTCAACCTCCCCAAAGTGTCCGAATGTGGTAATTGCACTTTTTTTGCACACTGGATGTGCCTAAAGTTATTGTTCACTATAAAAATGTAATTTCTACAACACTAACATCTCATGTGTATGTTTGATgtggtgctgtcctcagataatagcatggtttgctttcgccgtaaagcctttttgaaatctgacactgtggctggattaacaagaagttcatctttacaCCCATTTATAACACTGGTATGATTTATTAATTatttttatgagtatttctgtttttgaatttggcgcgctgctatttcactgggtgttgtcaaatcaatccctgCGTGAAGGGATCACTAAGAAGTTTGAAGTCATACATTATCAGATAACATTGGCAATAGGCTAGATTTGTTCCTATTACCAAAGGATTCAATTGAATGTAGCTATAGCTTAAACACAGACCAAATCTAAGCTTACCTTGTTTGATGTGTGCTGTTTGGTGAAAACATtgtgtaaaataaacattttgactcTTGGGGCTGGTGATCCATAATGGTAGGTCACAGGCAGAAGGCTTTTGGTGTCTATCACCGTATTCcatgtttattttgtttatgcTTCACAACGCACAACGGAATGTTGGTAGCAGCCATCTTGAAATTAGGTAATCGTCTCGGCCTGCCCTTATAAATGTTTATGCCCATTTTGGTAGTAAGTCATACCAAAGATTTGAAGGCACCGATCAATAGCCAAGATACTCAGCTTTCCGCAGACACCCTGCTTTTGGCGATAGGGGCTACCTTCTCATACCAGACTGAATTAAatggaaaaaaaatctaattgagTCCCCAAATATGGGGACTTTTACATTTGAGAGATAACAATTCCACTTGTTGGATATGTTAAAGCTAgaataatgtgacttgcaggcctgatgagGCTTGTAAAACAGGACATTTCTAACACCACTGTGTTATGGTATAATTAGGCCTTCAAATAAAGGCCttattatgtacagtgccttgcgaaagtattcggcccccttgaactttgcgacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU71194 True 1405 lncRNA 0.38 1 58585290 58586694

Neighbor

gene id symbol gene type direction distance location
LOC110525578 NA coding upstream 621467 57961716 ~ 57963823 (+)
wdr11 wdr11 coding upstream 647302 57806134 ~ 57940604 (+)
LOC110525562 LOC106576893 coding upstream 819892 57622267 ~ 57765398 (+)
LOC118964920 NA coding upstream 863265 57694498 ~ 57722025 (+)
vsir cssa18h10orf54 coding upstream 1522439 57035608 ~ 57062851 (+)
fam160b1 fam160b1 coding downstream 221676 58808370 ~ 58838199 (+)
trnaa-ugc NA coding downstream 475113 59061807 ~ 59061880 (+)
LOC110525756 NA coding downstream 623312 59210006 ~ 59212175 (+)
erlin1 LOC106576878 coding downstream 697630 59284324 ~ 59299682 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 753845 59340539 ~ 59342276 (+)
G64274 NA non-coding upstream 24820 58560233 ~ 58560470 (+)
G64273 NA non-coding upstream 26020 58559071 ~ 58559270 (+)
G64269 NA non-coding upstream 30720 58554212 ~ 58554570 (+)
G64250 NA non-coding upstream 31387 58553678 ~ 58553903 (+)
G64264 NA non-coding upstream 42431 58542598 ~ 58542859 (+)
G64293 NA non-coding downstream 1139 58587833 ~ 58588113 (+)
G64242 LOC106586415 non-coding downstream 4419 58591113 ~ 58661566 (+)
G64241 NA non-coding downstream 10014 58596708 ~ 58598513 (+)
G64312 NA non-coding downstream 75017 58661711 ~ 58661946 (+)
G64313 ablim1 non-coding downstream 75519 58662213 ~ 58662478 (+)
G63959 fgfr2 other upstream 362160 58221522 ~ 58223130 (+)
G63958 NA other upstream 417112 58166565 ~ 58168178 (+)
G61806 NA other upstream 2333275 56249888 ~ 56252015 (+)
G61804 NA other upstream 2337520 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 2554919 56019476 ~ 56030371 (+)
G64292 NA other downstream 164 58586858 ~ 58587585 (+)
G64315 NA other downstream 78640 58665334 ~ 58665906 (+)
G64338 NA other downstream 112602 58699296 ~ 58700379 (+)
G65442 NA other downstream 737942 59324636 ~ 59325129 (+)
G66188 NA other downstream 1354792 59941486 ~ 59942064 (+)

Expression


Co-expression Network