G64339


Basic Information

Item Value
gene id G64339
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 58700456 ~ 58700805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU71285
ATGTTAATTTgctcactcttttgttgctgaaaaTGTTCTTGAAGGGTATTCAAgtttttaaaaggcttctaaagttcgTAATTTCCACTTGGTAATTTcaaacttgatttgccctaacgaaaaatgtatcaacccctacaaaaaagtccattaattataattcacAAAAAATGCACAGTTCCTGTTGTTGCCccgttattttactgctgtagaaaactggctgaatttaagatcctatatctgtattaCTACTAGGGAACACAAAAGGAGTGCTGTTTGTCTGAAGGGGGACAGAGACCGACAGCGAAGAGTAATACACAAGAggttatagtcaatgaatagtataTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71285 True 350 lncRNA 0.35 1 58700456 58700805

Neighbor

gene id symbol gene type direction distance location
LOC110525578 NA coding upstream 736633 57961716 ~ 57963823 (+)
wdr11 wdr11 coding upstream 762468 57806134 ~ 57940604 (+)
LOC110525562 LOC106576893 coding upstream 935058 57622267 ~ 57765398 (+)
LOC118964920 NA coding upstream 978431 57694498 ~ 57722025 (+)
vsir cssa18h10orf54 coding upstream 1637605 57035608 ~ 57062851 (+)
fam160b1 fam160b1 coding downstream 107565 58808370 ~ 58838199 (+)
trnaa-ugc NA coding downstream 361002 59061807 ~ 59061880 (+)
LOC110525756 NA coding downstream 509201 59210006 ~ 59212175 (+)
erlin1 LOC106576878 coding downstream 583519 59284324 ~ 59299682 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 639734 59340539 ~ 59342276 (+)
G64336 NA non-coding upstream 3356 58696700 ~ 58697100 (+)
G64325 NA non-coding upstream 17500 58682743 ~ 58682956 (+)
G64324 NA non-coding upstream 18262 58681746 ~ 58682194 (+)
G64313 ablim1 non-coding upstream 37978 58662213 ~ 58662478 (+)
G64312 NA non-coding upstream 38510 58661711 ~ 58661946 (+)
G64341 NA non-coding downstream 1350 58702155 ~ 58702398 (+)
G64342 NA non-coding downstream 3373 58704178 ~ 58704388 (+)
G64345 NA non-coding downstream 10927 58711732 ~ 58711948 (+)
G64346 NA non-coding downstream 12442 58713247 ~ 58713516 (+)
G64347 NA non-coding downstream 13524 58714329 ~ 58771034 (+)
G64338 NA other upstream 77 58699296 ~ 58700379 (+)
G64315 NA other upstream 34550 58665334 ~ 58665906 (+)
G64292 NA other upstream 112871 58586858 ~ 58587585 (+)
G63959 fgfr2 other upstream 477326 58221522 ~ 58223130 (+)
G63958 NA other upstream 532278 58166565 ~ 58168178 (+)
G65442 NA other downstream 623831 59324636 ~ 59325129 (+)
G66188 NA other downstream 1240681 59941486 ~ 59942064 (+)
G67806 LOC106581772 other downstream 2614069 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 3028960 61729765 ~ 61733388 (+)
G70011 NA other downstream 4574158 63274963 ~ 63275296 (+)

Expression


Co-expression Network