G66487


Basic Information

Item Value
gene id G66487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60524239 ~ 60559757 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU73652
tctcccaggtggcttgtggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatgaacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatcatgctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggataattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttccgtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggttgcaaagttcaagggggccgaatactttcgcaaggcactgtattgaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73652 True 818 lncRNA 0.41 2 60524239 60559757

Neighbor

gene id symbol gene type direction distance location
prdm8 LOC106576848 coding upstream 22621 60496970 ~ 60501618 (+)
rrp12 rrp12 coding upstream 96528 60403081 ~ 60427711 (+)
LOC110521558 LOC106576852 coding upstream 132613 60374052 ~ 60391626 (+)
LOC110526060 zdhhc16 coding upstream 154050 60301493 ~ 60370189 (+)
LOC110526122 LOC106576844 coding downstream 557493 61117250 ~ 61227125 (+)
LOC110526134 NA coding downstream 570349 61091580 ~ 61132005 (+)
lrrfip2 lrrfip2 coding downstream 782348 61342105 ~ 61401807 (+)
LOC110526206 fam83h coding downstream 877850 61437607 ~ 61488427 (+)
LOC110526212 LOC106576837 coding downstream 941257 61501014 ~ 61505305 (+)
G66480 NA non-coding upstream 12205 60511670 ~ 60512034 (+)
G66475 NA non-coding upstream 18430 60505582 ~ 60505809 (+)
G66435 NA non-coding upstream 29144 60494733 ~ 60495095 (+)
G66375 NA non-coding upstream 203406 60320593 ~ 60320833 (+)
G66372 NA non-coding upstream 207703 60316305 ~ 60316536 (+)
G67445 NA non-coding downstream 448772 61008529 ~ 61008729 (+)
G67460 NA non-coding downstream 461096 61020853 ~ 61021079 (+)
G67592 NA non-coding downstream 680475 61240232 ~ 61240608 (+)
G66188 NA other upstream 582175 59941486 ~ 59942064 (+)
G65442 NA other upstream 1199110 59324636 ~ 59325129 (+)
G64338 NA other upstream 1823860 58699296 ~ 58700379 (+)
G64315 NA other upstream 1858333 58665334 ~ 58665906 (+)
G64292 NA other upstream 1936654 58586858 ~ 58587585 (+)
G67806 LOC106581772 other downstream 755117 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 1170008 61729765 ~ 61733388 (+)
G70011 NA other downstream 2715206 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 4249832 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 5355978 65915581 ~ 65922285 (+)

Expression


Co-expression Network