G67622 (mrp2)


Basic Information

Item Value
gene id G67622
gene name mrp2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 61300176 ~ 61302265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU74859
aactaaacgcgcaaacaaaaagtaGGTATTTGAAcgtaaatgatggactttatcgaacaaaacaaacattcattgtggaactgggattacTGGAAGTGCagtcagatgaagatcatcaaaggtaagtgaatatttataatgctatttctgacttctgttgactccaccaCATGGtgcctgagcgctgtactcagattattacatggtgtgctttttccataaagcttttttgaaatctgacatagtggttgcattaaggagaagtatatctttaattccatgcataacacttgtattttcatcaacatttatgatgagtatttttgtaaattgatgtggctctctgcaaaatcaccggatgttttggaagtaaaacattactgaacataacgcgccaatgtaaactgagatttttggatataaatatgaactttatcaaacaaaacatacatgtattgtgtaacatgaagtcctatgactgtcatctgatgaagatcatcaaaggttagtaatTCATTTGAtcaatatttctgctttttgtcaCCTGACCTTGTCAGCCAATCAGAGGCCCACCTGGGGTAAGATAACTACCATGCTGACCACAGCTCCAGGCTGACCCCAGCTCTTTAAACTCATGGGCTCCCCACCAACACACCAGGTGGACAGTCCTCCGCTCTGGACTTCCTAACTATGTGTTAGTGCATGAATTACCATGTAAATGGACTTTGTTGGGGTTCAGGAAATCACTTCCACTGGGTTCCCTCTTAAGTGTGGCAATAAACGTGTATTCTGTATATCTGTCTCCTACTGGAAATTACCAAGCCTTATAACTGAGGCGCCAGGACAGTTGTACCTATATCTAAACTGGCACCTCTTTCGAGACCACTACCAGTTGGTGGTGTTCTATTTTAATACTACATTTTCAAAATTGACTATAAAACATTCTATTTTCGCACACCCAAAATCCATACTATTTACGGGTTTTCGGACACGGCCAAAGTCCATAGGCCTAGAACTGGTTGACTCACTTGAGGATCTGTGGACTGGCAAAGGATAGGAGGTCCGTTATGAGCTTGAAGATAGCTGATTCCCACAGGACCCCTTTAAATGTGGTAGCGATGGTGGGGATGAGCCACGACTTGGGGTAGTattccttctcttctttcttcttcttcttcttctcctccttcttctccttttcatcccccttttcctcCATCATCAGCACATCCTGGCTGACCCCCTTCCCCAGCCTATTCTGATGCCCGTTTTGGAGGCCCTCTCCCTGGCCTTTGCTtgccttctcctcccctctcttcctcattTTGGTCTGAAGTCTGGTTCTGGCTGCTTTCAGCTCTGTCTGCATGGTCTGCAGGAAACGCTGACTGATCTGGAGAGTACTCTCTGCCTCACTTAGCTCCCACAGGTCCTTCTGGACCAGAGGGCGCTTGAAACCATT

Function

symbol description
mrp2 A structural constituent of ribosome. Predicted to be involved in translation. Located in mitochondrion. Part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 38. Orthologous to human MRPS14 (mitochondrial ribosomal protein S14).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74859 True 1462 lncRNA 0.40 2 61300176 61302265

Neighbor

gene id symbol gene type direction distance location
LOC110526122 LOC106576844 coding upstream 73051 61117250 ~ 61227125 (+)
LOC110526134 NA coding upstream 168171 61091580 ~ 61132005 (+)
prdm8 LOC106576848 coding upstream 798558 60496970 ~ 60501618 (+)
rrp12 rrp12 coding upstream 872465 60403081 ~ 60427711 (+)
LOC110521558 LOC106576852 coding upstream 908550 60374052 ~ 60391626 (+)
lrrfip2 lrrfip2 coding downstream 39840 61342105 ~ 61401807 (+)
LOC110526206 fam83h coding downstream 135342 61437607 ~ 61488427 (+)
LOC110526212 LOC106576837 coding downstream 198749 61501014 ~ 61505305 (+)
herc4 herc4 coding downstream 215688 61517953 ~ 61540937 (+)
LOC110526236 sirt1 coding downstream 246916 61549181 ~ 61561338 (+)
G67566 NA non-coding upstream 18807 61271630 ~ 61281369 (+)
G67567 mrp2 non-coding upstream 36824 61247192 ~ 61263352 (+)
G67595 NA non-coding upstream 54933 61243450 ~ 61245243 (+)
G67594 NA non-coding upstream 58299 61241562 ~ 61241877 (+)
G67593 NA non-coding upstream 59041 61240837 ~ 61241135 (+)
G67812 NA non-coding downstream 17328 61319593 ~ 61319867 (+)
G67821 NA non-coding downstream 18948 61321213 ~ 61321505 (+)
G67826 NA non-coding downstream 24521 61326786 ~ 61327148 (+)
G67828 NA non-coding downstream 34361 61336626 ~ 61336958 (+)
G67818 NA non-coding downstream 63397 61365662 ~ 61403350 (+)
G66188 NA other upstream 1358112 59941486 ~ 59942064 (+)
G65442 NA other upstream 1975047 59324636 ~ 59325129 (+)
G64338 NA other upstream 2599797 58699296 ~ 58700379 (+)
G64315 NA other upstream 2634270 58665334 ~ 58665906 (+)
G64292 NA other upstream 2712591 58586858 ~ 58587585 (+)
G67806 LOC106581772 other downstream 12609 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 427500 61729765 ~ 61733388 (+)
G70011 NA other downstream 1972698 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 3507324 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 4613470 65915581 ~ 65922285 (+)

Expression


Co-expression Network