G68112


Basic Information

Item Value
gene id G68112
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 61954113 ~ 61955780 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU75383
GTGCACAGGTGTAAGAGAAGACACAGAAGTGTGCTTTCATAGGTCCCATCTGCTTCTGATGATTGTATTCCTACTGAGATCGCATTATTCTACTTCTTTTAATGTGAATGTATCTCCTAACATGCTTATGCATAGTGTATTTCAGTCATTGAGCCACAATGGCAATAAGGAAGACCATAATTCACAGAACAACAGATATACGAGGCTAGATGAAAATAAGAGACCGAATAGCCTTCTGCTAATGCTGCCAGGAACCTGACACAGAACCACAGACCGTGTCCTGTAATTAAAGAAATTGTCACATCACATACAGTGTCTGTCTGACAATGGTGGAAAGCATTAACAAGGCCTCGATCTCTACTGTTCAGTATGTGGTGCCACAGGGATGAGTCCCACCATAACTGAACTCCAGACAAACAATGATTACATTATGATATAATCAAATAACTGTTGTACTGTAGAGAGGCATCTCTATTTTCTTCTGTATGAGCCACACAAAGAGGCTATCAACTAAACCAACTGTCAGCTAAAACCCATATGCAGCATTTGTTTAAAGGCCCACTCACTAATGAATCTCATGAGACATTAATACGTGGTACTGTTTAAGAATCAATGGGTGTATGTCATCAAAACAATTGACTGTAAATATCACAGTGGGCCTTTAATGCCCCTATCAGAGTGGGCCTTTAATTCCCCTATCACAGTGGGCCTTTAATTCCCCTATCACAGTGGATCTTTAATGCCCCTATCACAACGGGCCTTTAATGCCCCTATTACAGTGGGCCACTAATGCCCCTATCACATTGGGCCTTTAATGCCCCTATCACATTGGGCCTTTAATGCCCCTATCACAGTGGGCCTTTAATACCCCTATCACAGTGGGCCATTAATGCCCCTATCACAGTGGGCCATTAATGCCCCTATCACAGTGGACCTTTAATGCCCCTATCACAGTGGGCCACTAATGCCCCTATCACAGTGGGCCATTAATGTCGCCCAGATTCAGTCCTTTCAGTTGAACCCGGGTGGCATACACTGTATTAGGACACTGATCTACAGGTATTCATACCGTCAAAGATAATGAAAAATATCCATAGCATTTTTTGTCCATAAACTGTGTACTGTGTAAGACTCCTTTCCAAGCAGATTCAAGGCAATTTTTGCTGTTGAAACACCACAAGACAATGGCCAAGGCTTGTAAGTGATACCTCCACACCACCAGCTAGGTCATCTGTCATTGTAATAGTATCCTCCTTTAGGAATGTTGTACACATGGCAATTCAGTCTACCCATATGTTACCTACTCTACTAGAGCTGCCCTAGTTAGTGAAGCAGCCACCTAAGCTCTTAGAGGGAAACAGCTTACACAACATGCGTAGAATAGAGACTGCAGAGGCAAACACAGAATCACACGCGTGGCATTGGGAGCATGGCTGTCGTACCTTTCTCTCCAGTTTCATCACCGACGATTTTCCCGGCTCGTACTCGAAGATGCTCTTGGGCTCGGCACGGTACTTCCTGGTGTCTACCTTTTTGTCAGGGGGCTCCCAGTCGTTCCtgtaggggggaggggaggagagagcaaaTCCCTATTAAATCAAGCAGTCTCCATGGCAACTAGCTGGGGCTAGTTTTGTGGGTAACAGCTCCATCATCAACAGTGTTTTC

Function

NR:

description
hypothetical protein cypCar_00004009, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75383 True 1668 lncRNA 0.37 1 61954113 61955780

Neighbor

gene id symbol gene type direction distance location
sec23ip LOC106576824 coding upstream 208956 61733628 ~ 61745157 (+)
inpp5f LOC106576825 coding upstream 244044 61687566 ~ 61710069 (+)
bag3 bag3 coding upstream 269945 61677780 ~ 61684168 (+)
pkd2l1 pkd2l1 coding upstream 307932 61635163 ~ 61646181 (+)
atoh7 atoh7 coding upstream 322586 61629925 ~ 61631527 (+)
fam204a LOC106576816 coding downstream 108470 62064250 ~ 62097505 (+)
LOC110526440 LOC106576815 coding downstream 197569 62153349 ~ 62168687 (+)
LOC110526492 LOC106576813 coding downstream 405209 62360989 ~ 62366199 (+)
LOC110526511 LOC100194723 coding downstream 427910 62383690 ~ 62390008 (+)
LOC110526533 LOC106576809 coding downstream 479502 62435282 ~ 62492911 (+)
G68046 NA non-coding upstream 5380 61832025 ~ 61948733 (+)
G68076 LOC106576818 non-coding upstream 14505 61937520 ~ 61939608 (+)
G68075 NA non-coding upstream 27964 61921074 ~ 61926149 (+)
G68105 pdli1 non-coding upstream 37559 61902275 ~ 61916554 (+)
G68019 NA non-coding upstream 160229 61793049 ~ 61793884 (+)
G68114 NA non-coding downstream 3033 61958813 ~ 61959077 (+)
G68116 NA non-coding downstream 5247 61961027 ~ 61961228 (+)
G68117 NA non-coding downstream 7396 61963176 ~ 61963472 (+)
G68118 NA non-coding downstream 8457 61964237 ~ 61964752 (+)
G68119 NA non-coding downstream 9034 61964814 ~ 61965178 (+)
G67930 mcmbp other upstream 220725 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 638861 61314874 ~ 61315252 (+)
G66188 NA other upstream 2012049 59941486 ~ 59942064 (+)
G65442 NA other upstream 2628984 59324636 ~ 59325129 (+)
G64338 NA other upstream 3253734 58699296 ~ 58700379 (+)
G70011 NA other downstream 1319183 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 2853809 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 3959955 65915581 ~ 65922285 (+)
G73515 NA other downstream 4331899 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 4464715 66417495 ~ 66424081 (+)

Expression


Co-expression Network