G68132 (LOC106576819)


Basic Information

Item Value
gene id G68132
gene name LOC106576819
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 61981733 ~ 61982921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU75404
GTCTTTGGTGTATGTCACACTCATCAGATCCTCGGACAGGATGAGATGCGGATGGAACTATTTCCTGCATCTTCTCCCAGACTCTGAACTGCAGGTTGCCTAGGTACTTTGCCACGTGGATCAGTGATCCTGAAATCTTCTCCGGATTTGACAGGGTGCACTTTGCTTTTTTGACTGTGGCCTTGAAATTCTGCAGGAACGAGATATCGTCGGCTCCCAGCTCTTTCTCTATGGCTCTGATTGTGTCCGAAAGTGATGATATCTCCCTGCTCATCTCTTCAATCTTTTTTGTCATCGTCTGACTCTTTTGCTTCTCTTCCTTCCTCAGTGCAGCAATCCTGGCTTCCTCTTCATCCTGTAGAAACTGGTGAAGCTTCCCAAACTCCTCCTTAATCTGCTTCTCTGTGTGCTGGGCCTGTGTCTTAATGTGCTCTGCTGTTTGATCACAGGTCAGTTTAACTTCATTTAAGACCTCCAGCATATCCTTTAGGGGCTTCAGTGCCATCTTAACTTCCTCCTTATGATCCAGTGCAGCTTCATCTATGGGGATGCAGTCATGCTTTTTATGGTTCTTTGAATCCCGGCACACTACACAAATTGACTGCTTATCATCCAGACAGAACAGTTTGAGTTTCTCACTGTGCAGACTGCAATGCACATCTGGCCCTGCTGAATATCTCTGACCTTTCTCCTGTAAGTAGGCATCACACAGGTTCTTTAAAGCTAGGTTACATGGGGGGTTATCCATTGACAATCTTTTCCGGCACATTGGACATTCTCGAGATCCCTTCTGTTTCCAGAATTCCTTCAGACAGGCTTTGCAGACGCTGTGGGTACATGACAGGAAAACGGGATCCCTGAAGATGTCACAGCATACAGTACAGCAGAGATCCTCCTCTGGGAGGGAAGGTTTAGATTCCATTTTCTCACCACCACCGTCTCTCTTCTGTGATGGCTTCTGGAATTGAGGTTTACTTTCACTTTTGAAAACTTACAGCAGTGAGGTCTGTCAAACTTGGAAATCACAATGTATAGTAGATTATGCTGTTTCTTCAACCATATTCAATGGTTATTTGAATGTTGATTATTTCCAACAATTATAAGTCCACAGATAAGGCAAATAAATAATTTAGACCGAATGTTGTGAGCATTACTGAATAGCTACATGCTACAGTGTGGTTCCGTTGTG

Function

NR:

description
zinc-binding protein A33-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75404 True 1189 lncRNA 0.44 1 61981733 61982921

Neighbor

gene id symbol gene type direction distance location
sec23ip LOC106576824 coding upstream 236576 61733628 ~ 61745157 (+)
inpp5f LOC106576825 coding upstream 271664 61687566 ~ 61710069 (+)
bag3 bag3 coding upstream 297565 61677780 ~ 61684168 (+)
pkd2l1 pkd2l1 coding upstream 335552 61635163 ~ 61646181 (+)
atoh7 atoh7 coding upstream 350206 61629925 ~ 61631527 (+)
fam204a LOC106576816 coding downstream 81329 62064250 ~ 62097505 (+)
LOC110526440 LOC106576815 coding downstream 170428 62153349 ~ 62168687 (+)
LOC110526492 LOC106576813 coding downstream 378068 62360989 ~ 62366199 (+)
LOC110526511 LOC100194723 coding downstream 400769 62383690 ~ 62390008 (+)
LOC110526533 LOC106576809 coding downstream 452361 62435282 ~ 62492911 (+)
G68130 NA non-coding upstream 3670 61977849 ~ 61978063 (+)
G68127 NA non-coding upstream 5636 61975881 ~ 61976097 (+)
G68119 NA non-coding upstream 16555 61964814 ~ 61965178 (+)
G68118 NA non-coding upstream 16981 61964237 ~ 61964752 (+)
G68117 NA non-coding upstream 18261 61963176 ~ 61963472 (+)
G68384 NA non-coding downstream 431759 62414680 ~ 62416124 (+)
G68469 NA non-coding downstream 549248 62532169 ~ 62532538 (+)
G68472 NA non-coding downstream 552687 62535608 ~ 62535941 (+)
G68479 NA non-coding downstream 557194 62540115 ~ 62540433 (+)
G68498 NA non-coding downstream 585432 62568353 ~ 62568619 (+)
G67930 mcmbp other upstream 248345 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 666481 61314874 ~ 61315252 (+)
G66188 NA other upstream 2039669 59941486 ~ 59942064 (+)
G65442 NA other upstream 2656604 59324636 ~ 59325129 (+)
G64338 NA other upstream 3281354 58699296 ~ 58700379 (+)
G70011 NA other downstream 1292042 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 2826668 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 3932814 65915581 ~ 65922285 (+)
G73515 NA other downstream 4304758 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 4437574 66417495 ~ 66424081 (+)

Expression


Co-expression Network