G93414


Basic Information

Item Value
gene id G93414
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83676068 ~ 83718069 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU102877
TTTTGAGAATTTTTATTTGACATTTGAATTGTACAACAATGATGATTCACTTTCTGTTTCTAAAAATCACTGGCAAAAAAAGATGAATTGCATCAGTGGGTATGTGCTTTTCATAGCACAATATACATACAGCCCTGTGTGtaagaaacaacaccataaatcaCTGTTCACAatatctccctccatcactccctcgctctcgctcccatccttcctctcaccctcctccatccctctctcagaCAGCCACACTGTTAGGGATGCGGTCAGGAGAGAAGTAGTAGTAGGGTAGTTTCTTGCCTTCGTTGCGGATCTTGATGGCACTGCTGACCTCTGCCAGTCTCTTCCTGAACGATTCCATGGCCTCCTTCACAGGCTTCTCTATGAAGTGCTCATCTGGGTACATCCCCAGGAAcagctggtgggggggggggagagagagtgaaggagagaaataAGCATGAGATAATTGTGTGGAGGGATGTCATAGTTTAGTTTTCGCTGCAACCAGGTGGTAGAAGAAGGAAAACCTGTGTCAGATGTCCATGGGAGGGGTGACACATGAGTGACACTGACAAACCAACTGACATGTTTACATGTTCAGTAACACTTCCACCGCAGCAGAGTTATCCAGTTCTTACCCAGGTCTTTGTCGTGGGGACTGTTGGCTTGCAGTAAGATCTTCACTCTGTCCAGAGAAGCAATGGTGTATTTGGCATGTTCACCATCTGACTAATAAGACAATCTTAGTTACAGATAGAACAGAGTAATAGCCTCAATATAACTGGCAGATGGATGATGATACACACAAACAGTTATAGCAACAGACCTTGACCACCGTCATGTGACTTCTCCAGGCACCGTATCTACTGTATAGACAACAGACCTTGACCACTGTCATGTGACTTCTCCAGgcaccatatctactgtatagacaACAGACCTTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102877 True 948 lncRNA 0.45 2 83676068 83718069

Neighbor

gene id symbol gene type direction distance location
LOC110530763 LOC106577187 coding upstream 8397 83511117 ~ 83667671 (+)
LOC110530741 LOC106577189 coding upstream 192057 83452248 ~ 83484011 (+)
LOC110530670 NA coding upstream 233937 83407651 ~ 83442131 (+)
LOC110530624 cssa18h10orf11 coding upstream 759657 82456299 ~ 82916411 (+)
LOC110530588 LOC106577200 coding upstream 1496991 82172076 ~ 82179077 (+)
LOC110530841 LOC106613168 coding downstream 3790 83721859 ~ 83798056 (+)
LOC110530850 LOC106577251 coding downstream 80362 83798431 ~ 83817516 (+)
zgc:110319 nfu1 coding downstream 122687 83840756 ~ 83851899 (+)
LOC110530876 LOC106577249 coding downstream 134497 83852566 ~ 83889994 (+)
LOC110530893 LOC106577247 coding downstream 185713 83903782 ~ 83951597 (+)
G93469 NA non-coding upstream 69162 83605746 ~ 83606906 (+)
G93456 NA non-coding upstream 148546 83526395 ~ 83527522 (+)
G93445 NA non-coding upstream 171019 83504333 ~ 83505049 (+)
G93444 NA non-coding upstream 172204 83503639 ~ 83503864 (+)
G93440 NA non-coding upstream 174902 83500922 ~ 83501166 (+)
G93512 NA non-coding downstream 25114 83743183 ~ 83743415 (+)
G93513 NA non-coding downstream 25669 83743738 ~ 83744223 (+)
G93519 NA non-coding downstream 46147 83764216 ~ 83765131 (+)
G93522 NA non-coding downstream 54305 83772374 ~ 83772921 (+)
G93362 NA other upstream 342492 83333266 ~ 83333576 (+)
G93204 NA other upstream 586136 83088531 ~ 83089932 (+)
G92575 trmt13 other upstream 1494272 82180946 ~ 82181796 (+)
G94463 NA other downstream 327242 84045311 ~ 84048149 (+)
LOC110532822 LOC106577256 other downstream 664688 84373236 ~ 84410052 (+)
G95702 NA other downstream 1422071 85140140 ~ 85141006 (+)
G95821 NA other downstream 1516752 85234821 ~ 85235394 (+)
G96133 NA other downstream 1919678 85637747 ~ 85638055 (+)

Expression


Co-expression Network