G94449


Basic Information

Item Value
gene id G94449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83966551 ~ 83966754 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU104132
TCGTAAAGACAATCCTGCTGGTGGGAGATCTTGTAGCCTCTCAGCAAAATGCAGCAGTAACACAGGTAGAACTGGAACTTGAAGGCCAAGACTGACAATGTAAGAATAAAAATGACAAAGATGGGCACTAAAAGTTTAACTCTCAAGATGTGCGTGCAGTATTCAACATCGAAGTCAAACACTTTAGTGGTCTGTGTTGATTCT

Function

NR:

description
LOW QUALITY PROTEIN: toll-like receptor 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104132 True 204 lncRNA 0.41 1 83966551 83966754

Neighbor

gene id symbol gene type direction distance location
LOC110530893 LOC106577247 coding upstream 14954 83903782 ~ 83951597 (+)
LOC110530876 LOC106577249 coding upstream 76557 83852566 ~ 83889994 (+)
zgc:110319 nfu1 coding upstream 114652 83840756 ~ 83851899 (+)
LOC110530850 LOC106577251 coding upstream 149035 83798431 ~ 83817516 (+)
LOC110530841 LOC106613168 coding upstream 168495 83721859 ~ 83798056 (+)
zgc:154058 LOC106577246 coding downstream 10364 83977118 ~ 84031022 (+)
LOC110530965 fam213a coding downstream 116236 84082990 ~ 84097350 (+)
LOC110531002 NA coding downstream 141654 84108408 ~ 84112085 (+)
LOC110531025 NA coding downstream 166901 84133655 ~ 84152127 (+)
LOC110532822 LOC106577256 coding downstream 406482 84373236 ~ 84410052 (+)
G94440 NA non-coding upstream 17615 83948705 ~ 83948936 (+)
G94401 NA non-coding upstream 31101 83872508 ~ 83935450 (+)
G94379 NA non-coding upstream 164202 83801618 ~ 83802349 (+)
G93525 NA non-coding upstream 189650 83776547 ~ 83776901 (+)
G93524 NA non-coding upstream 190145 83775980 ~ 83776406 (+)
G94451 NA non-coding downstream 1126 83967880 ~ 83968109 (+)
G94452 NA non-coding downstream 6517 83973271 ~ 83973671 (+)
G94480 NA non-coding downstream 25679 83992433 ~ 84073633 (+)
G94461 NA non-coding downstream 64800 84031554 ~ 84036458 (+)
LOC110530763 LOC106577187 other upstream 416961 83511117 ~ 83667671 (+)
LOC110530741 LOC106577189 other upstream 493327 83452248 ~ 83484011 (+)
G93362 NA other upstream 632975 83333266 ~ 83333576 (+)
G93204 NA other upstream 876619 83088531 ~ 83089932 (+)
G92575 trmt13 other upstream 1784755 82180946 ~ 82181796 (+)
G94463 NA other downstream 78557 84045311 ~ 84048149 (+)
G95702 NA other downstream 1173386 85140140 ~ 85141006 (+)
G95821 NA other downstream 1268067 85234821 ~ 85235394 (+)
G96133 NA other downstream 1670993 85637747 ~ 85638055 (+)

Expression


Co-expression Network