G102807


Basic Information

Item Value
gene id G102807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 94414511 ~ 94417290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU115007
cgtaaggtcattactagtacgtaaggtcataaggtcatcactagtacgtaaggtcattactagtacgtaaggtcatcactagtacgtaaggtcgtaaggtcattactagtacgtaaggtcatAAGGTCATCACTCGTACGTAAGGTCATtactagtacgtaaggtcatcactagtacgtaaggtcattactagtacgtaaggtcattactagtacgtaaggtcattactagtacttaaggtcatcactagtacgtaaggtcattactagtacgtaaggtcatcactagtacgtaaggtcattactagtacgtaaggtcatcactagtacgtaaggtcatCACCAGTACGTAAGGTCATTACCAGTACGTAAGGTCATCACTAGTACGTAATAGAAAATAAACTGACATACGTGTTCTTTTGTAGATGTAGGAAATGTTCCTTGTTGTCAATGATCAATGAATAAGAACGTTCCTCGGGTTCTTCAGTCTGAAATGAGTTCCAACACAACACAGTCGCATGAAAATACACCAGTGGTCATTTACCATCATGTGTCAAACCACGAGTTGGGAGACCTGTAGAGGTAACCTTACCTTTCCCGAGTCAGGAAGTCTGTCTGCATTTCTTGCCCATCTCCTGTGAACAAGCTGAGGCTTTACAACCGTGTAGCTGGAAAGTTTAGATGTTTGTCCattgaaaatat

Function

NR:

description
PREDICTED: disintegrin and metalloproteinase domain-containing protein 9-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115007 True 701 lncRNA 0.41 2 94414511 94417290

Neighbor

gene id symbol gene type direction distance location
LOC110533014 LOC106575474 coding upstream 68396 94341947 ~ 94346115 (+)
LOC118936691 LOC106575474 coding upstream 135936 94273861 ~ 94278575 (+)
mmp21 mmp21 coding upstream 325508 94073070 ~ 94089003 (+)
LOC110515885 hem4 coding upstream 346514 94054281 ~ 94067997 (+)
LOC118966112 NA coding upstream 387035 94023910 ~ 94027476 (+)
LOC110514579 LOC106592849 coding downstream 105106 94522396 ~ 94559917 (+)
LOC110519363 LOC105888795 coding downstream 148718 94566008 ~ 94639453 (+)
LOC118966139 NA coding downstream 223931 94641221 ~ 94642172 (+)
LOC110499554 mtr coding downstream 225403 94642693 ~ 94715672 (+)
LOC110511675 ryr2 coding downstream 299865 94717155 ~ 95250071 (+)
G102804 NA non-coding upstream 4868 94408588 ~ 94409643 (+)
G102801 NA non-coding upstream 8961 94404940 ~ 94405550 (+)
G102795 NA non-coding upstream 19863 94394362 ~ 94394648 (+)
G102788 NA non-coding upstream 45180 94369004 ~ 94369331 (+)
G102778 NA non-coding upstream 75206 94337983 ~ 94339305 (+)
G102885 NA non-coding downstream 5146 94422436 ~ 94422727 (+)
G102897 NA non-coding downstream 28400 94445690 ~ 94446652 (+)
G102906 NA non-coding downstream 52699 94469989 ~ 94470513 (+)
G102907 NA non-coding downstream 61031 94478321 ~ 94483080 (+)
G102927 NA non-coding downstream 93347 94510637 ~ 94511155 (+)
G102769 NA other upstream 21196 94314693 ~ 94393315 (+)
G102740 NA other upstream 166580 94245497 ~ 94247931 (+)
G102710 NA other upstream 201603 94211049 ~ 94212908 (+)
G102505 NA other upstream 579319 93833124 ~ 93835192 (+)
LOC110511695 LOC106577385 other upstream 645023 93722388 ~ 93770095 (+)
G102912 NA other downstream 71392 94488682 ~ 94522297 (+)
G102936 NA other downstream 137774 94555064 ~ 94556189 (+)
G103091 NA other downstream 348884 94766174 ~ 94766557 (+)
G103584 NA other downstream 1061499 95478789 ~ 95480329 (+)
G103605 NA other downstream 1147049 95564339 ~ 95565530 (+)

Expression


Co-expression Network