LOC110507310 (LOC106595913)


Basic Information

Item Value
gene id LOC110507310
gene name LOC106595913
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9910470 ~ 9913331 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937466.1
TAAGTTCCAACACACACCCTTATCTCTGCAAACatctgcatcacacacacacacacacacagtcaggcaggcaacagagacagagagcaacacagagagaaggaaaacACTAAAGATACATAGGTGGGTTAAAGAGGAAACAACAACAACGAAGATTAAGTATGTAAACACGGTTATGTGAGCtattggatcactccaatatgGTATCCTTCCGTGCCGCAGGATACATTCCGAGTAAGGATTTTCAGGCTGGAACAATGGAGATGTGTAGTAGCGTGGTGTTGGGAGGCCTGGTGTTGTTGCTTCTACTGTGGTTGTTCAggctgaggagacagagacatgtcCATCTACCCCCAGGACCCTGCGCCCTGCCGCTTCTAGGAAACCTGCTTCAGATTGACAAACAGGCCCCCTTCAAGACCCTCACCAAGTGGAGTGGTGTGTATGGGCCAGTGATGACAGTGTATCTTGGGCCCCAGCGAGCCGTGGTGCTGGTGGGGTACGGGGCAGTCAAGGAGGCTCTGGTGGACCAGGCTGAGGATTTCACAGGACGAGCTCCTGTCCCCTTCCTGGTCcttgttaccaggggatacggccTGGCCATCAGTAATGGGGAGCGTTGGCGCCAGCTGCGTCGTTTCACCCTGACCACACTGAGAGACTTTGGGATGGGCCGTAAGAGGATGGAGGAGTGGGTACAGGAGGAGAGCCAACACCTCATAGACAGTCTGGACGCCACTAAAGCCGTGCCCTTCGATCCTCATCCATTCCTGAGTCGCACCGTGTCCAACGTCATCTGCTCCCTGGTGTTTGGCCAGCGCTTCGGCTATGACGATGACAACTTCTTGCACTTGCTCAACATCATCTCAGCTGTACTGCGCTTTGGAAGCAGCCCCTGTGGACAGCTGTACAACATCTTCCCCTGGCTGATGGAACACCTGCCTGGTCGGCAGCAAGTTGTGTTCGGCCAGATGGACGAGTTGAGAGGCTTTGTGATGAAAAAGATCCACGAGCACCAGGAGACCATTGACCCAGGCAACCCTAGAGACTTCACAGACTGCTTCCTCACCAGACTCAACCAGGAGAAGGATGTGTCCTCCTCTGAGTTCCATTACGAGAACCTGGTGTCCACAGTGTTGGACCTCTTCCTTGCAGGAACAGAGACCACCAGCACCACTCTCAGATATGCCTTCATGCTGCTCCTCAAATACCCCAACATTCAGGAGCACGTTCAGCAGGAGATCGACACAGTGATTGGCCGACAGCGCGTCCCTCAGATGGAGGACAGGAAGTCCCTCCCCTTCACAGAAGCCGTCATCCACGAGGTGCAGCGCTTCCTGGACATCGCCCCATTGAACCTCCCGCACTATGCCACCAAGAATATCTCATTCAGAGGGTACACTATCCCTCAGGGCACCGTGATCCTTCCGATGCTGCACTCTGTTCTGAGAGACCAGGACCACTGGGCCACGCCCACAACCTTCAATCCCAATCACTTCCTTGATCAGAACGGAAACTTTCAGAAGAACCCCGCCTTCTTGGCTTTCTCTGCAGGTAAGCGTGCCTGTGTGGGAGAGTCTCTGGCTCGTATGGAAATCTTTCTGTTCCTGGTGTCTCTGCTGCAACATTTCTCCTTCTCCTGCCCTGGAGGACCTGACAGCATTGACCTCAGCCCAGAGTTCAGCAGTTTCACTAACGTGCCGCGTCACTACCAGCTCATCGCTACACCCCGCTGACCAGGAGGGGAATTGCAGCCGGACCACAGGAGGAGTATAGatgagggaggtagggacagcacaggaggttggttccCATATGTCTGATGCCATTTCATAAGcttgttccagccattattattatgagccgttctcccctcagcagcctccactgagggACGGgtgtctatttttttttttttttttttttacatgacaaTGTGATGCGTTGTGATACTTTGTGATGTGTGTTCTTTAACAACGAATGCTTGGAGATTTTTCTGGTCAGTATAGGTGGATCAGGAGAAACTCAGGGTCCTGGGAGTGAAGTCctctttgtcctcgtcttgtcgtgtcccgtgtatatatatatttatatattttctttgcatatctttatatatattttttctcaaaaaatctcaactt
>XM_036937467.1
TAAGTTCCAACACACACCCTTATCTCTGCAAACatctgcatcacacacacacacacacacagtcaggcaggcaacagagacagagagcaacacagagagaaggaaaacACTAAAGATACATAGGCTGGAACAATGGAGATGTGTAGTAGCGTGGTGTTGGGAGGCCTGGTGTTGTTGCTTCTACTGTGGTTGTTCAggctgaggagacagagacatgtcCATCTACCCCCAGGACCCTGCGCCCTGCCGCTTCTAGGAAACCTGCTTCAGATTGACAAACAGGCCCCCTTCAAGACCCTCACCAAGTGGAGTGGTGTGTATGGGCCAGTGATGACAGTGTATCTTGGGCCCCAGCGAGCCGTGGTGCTGGTGGGGTACGGGGCAGTCAAGGAGGCTCTGGTGGACCAGGCTGAGGATTTCACAGGACGAGCTCCTGTCCCCTTCCTGGTCcttgttaccaggggatacggccTGGCCATCAGTAATGGGGAGCGTTGGCGCCAGCTGCGTCGTTTCACCCTGACCACACTGAGAGACTTTGGGATGGGCCGTAAGAGGATGGAGGAGTGGGTACAGGAGGAGAGCCAACACCTCATAGACAGTCTGGACGCCACTAAAGCCGTGCCCTTCGATCCTCATCCATTCCTGAGTCGCACCGTGTCCAACGTCATCTGCTCCCTGGTGTTTGGCCAGCGCTTCGGCTATGACGATGACAACTTCTTGCACTTGCTCAACATCATCTCAGCTGTACTGCGCTTTGGAAGCAGCCCCTGTGGACAGCTGTACAACATCTTCCCCTGGCTGATGGAACACCTGCCTGGTCGGCAGCAAGTTGTGTTCGGCCAGATGGACGAGTTGAGAGGCTTTGTGATGAAAAAGATCCACGAGCACCAGGAGACCATTGACCCAGGCAACCCTAGAGACTTCACAGACTGCTTCCTCACCAGACTCAACCAGGAGAAGGATGTGTCCTCCTCTGAGTTCCATTACGAGAACCTGGTGTCCACAGTGTTGGACCTCTTCCTTGCAGGAACAGAGACCACCAGCACCACTCTCAGATATGCCTTCATGCTGCTCCTCAAATACCCCAACATTCAGGAGCACGTTCAGCAGGAGATCGACACAGTGATTGGCCGACAGCGCGTCCCTCAGATGGAGGACAGGAAGTCCCTCCCCTTCACAGAAGCCGTCATCCACGAGGTGCAGCGCTTCCTGGACATCGCCCCATTGAACCTCCCGCACTATGCCACCAAGAATATCTCATTCAGAGGGTACACTATCCCTCAGGGCACCGTGATCCTTCCGATGCTGCACTCTGTTCTGAGAGACCAGGACCACTGGGCCACGCCCACAACCTTCAATCCCAATCACTTCCTTGATCAGAACGGAAACTTTCAGAAGAACCCCGCCTTCTTGGCTTTCTCTGCAGGTAAGCGTGCCTGTGTGGGAGAGTCTCTGGCTCGTATGGAAATCTTTCTGTTCCTGGTGTCTCTGCTGCAACATTTCTCCTTCTCCTGCCCTGGAGGACCTGACAGCATTGACCTCAGCCCAGAGTTCAGCAGTTTCACTAACGTGCCGCGTCACTACCAGCTCATCGCTACACCCCGCTGACCAGGAGGGGAATTGCAGCCGGACCACAGGAGGAGTATAGatgagggaggtagggacagcacaggaggttggttccCATATGTCTGATGCCATTTCATAAGcttgttccagccattattattatgagccgttctcccctcagcagcctccactgagggACGGgtgtctatttttttttttttttttttttacatgacaaTGTGATGCGTTGTGATACTTTGTGATGTGTGTTCTTTAACAACGAATGCTTGGAGATTTTTCTGGTCAGTATAGGTGGATCAGGAGAAACTCAGGGTCCTGGGAGTGAAGTCctctttgtcctcgtcttgtcgtgtcccgtgtatatatatatttatatattttctttgcatatctttatatatattttttctcaaaaaatctcaactt

Function

NR:

description
cytochrome P450 2F3-like

GO: NA

KEGG:

id description
K17685 CYP2A13; cytochrome P450 family 2 subfamily A13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937466.1 False 2144 mRNA 0.51 2 9910470 9913331
XM_036937467.1 True 2019 mRNA 0.52 2 9910470 9913331

Neighbor

gene id symbol gene type direction distance location
LOC118937662 NA coding downstream 63613 9846044 ~ 9847233 (-)
LOC110512181 LOC106605978 coding downstream 506977 9392946 ~ 9403493 (-)
LOC110520732 LOC106605979 coding downstream 561165 9330271 ~ 9349305 (-)
LOC118937655 pon2 coding downstream 581708 9322760 ~ 9328762 (-)
LOC110506813 LOC106573659 coding downstream 588816 9315853 ~ 9321654 (-)
LOC110493960 LOC106606059 coding upstream 87405 10000730 ~ 10007883 (-)
trnaa-ugc-2 NA coding upstream 185571 10098902 ~ 10098977 (-)
LOC110507454 LOC106584706 coding upstream 348989 10262320 ~ 10267649 (-)
LOC110507471 LOC106584706 coding upstream 387374 10300705 ~ 10309293 (-)
LOC118944052 NA coding upstream 403447 10316778 ~ 10354245 (-)
G112347 NA non-coding downstream 3344 9906905 ~ 9907126 (-)
G112341 NA non-coding downstream 14587 9894119 ~ 9895883 (-)
G112333 NA non-coding downstream 24239 9885447 ~ 9886231 (-)
G112078 NA non-coding downstream 125450 9784785 ~ 9785020 (-)
G112368 LOC106606028 non-coding upstream 36396 9949727 ~ 9964253 (-)
G112389 NA non-coding upstream 74065 9987396 ~ 9988396 (-)
G112398 NA non-coding upstream 99009 10012340 ~ 10013749 (-)
G112400 NA non-coding upstream 101544 10014875 ~ 10015487 (-)
G112076 LOC105018850 other downstream 130015 9779011 ~ 9780455 (-)
G112066 NA other downstream 148805 9761300 ~ 9761665 (-)
G111955 NA other downstream 275340 9634537 ~ 9635130 (-)
G111855 NA other downstream 470532 9439362 ~ 9439938 (-)
G111659 NA other downstream 842408 9067612 ~ 9068062 (-)
G112491 LOC106584755 other upstream 304821 10184147 ~ 10296999 (-)
G112567 NA other upstream 433140 10346471 ~ 10346935 (-)
G112928 NA other upstream 657111 10570442 ~ 10570808 (-)
G112965 NA other upstream 734934 10648265 ~ 10718658 (-)

Expression


Co-expression Network