G112078



Basic Information


Item Value
gene id G112078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9784785 ~ 9785020 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU127905
CTTTCTAGAGCCAGATGTTTCTGCTGGATGTGATGATGGATCCTCTTCATTTGAGAACACCTCCAAAACGCTTTGCAACAGGACACTTTTTGATTGGATAAATGCAGTGAGGTCCCTCCCCGTTTCCACCCCTTTACTTCCATTTGGTTCCTGGTGAACACCACCCTCTACCTACCACCTCACGTAGGTGGAACAACTCCTAAACCCAACACTCTGGGCCTGGGAAGACCTTCTAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU127905 True 236 lncRNA 0.37 1 9784785 9785020

Neighbor


gene id symbol gene type direction distance location
LOC110512181 LOC106605978 coding downstream 381292 9392946 ~ 9403493 (-)
LOC110520732 LOC106605979 coding downstream 435480 9330271 ~ 9349305 (-)
LOC118937655 pon2 coding downstream 456023 9322760 ~ 9328762 (-)
LOC110506813 LOC106573659 coding downstream 463131 9315853 ~ 9321654 (-)
LOC118944050 LOC106593475 coding downstream 482370 9284288 ~ 9302415 (-)
LOC118937662 NA coding upstream 61510 9846044 ~ 9847233 (-)
LOC110507310 LOC106595913 coding upstream 125450 9910470 ~ 9913331 (-)
LOC110493960 LOC106606059 coding upstream 215716 10000730 ~ 10007883 (-)
trnaa-ugc-2 NA coding upstream 313882 10098902 ~ 10098977 (-)
LOC110507454 LOC106584706 coding upstream 477300 10262320 ~ 10267649 (-)
G112069 LOC106573422 non-coding downstream 20371 9763829 ~ 9764414 (-)
G112068 NA non-coding downstream 21133 9763393 ~ 9763652 (-)
G112067 NA non-coding downstream 22211 9762038 ~ 9762574 (-)
G112061 NA non-coding downstream 32215 9752293 ~ 9752570 (-)
G112059 NA non-coding downstream 33328 9751217 ~ 9751457 (-)
G112333 NA non-coding upstream 100427 9885447 ~ 9886231 (-)
G112341 NA non-coding upstream 109099 9894119 ~ 9895883 (-)
G112347 NA non-coding upstream 121885 9906905 ~ 9907126 (-)
G112349 NA non-coding upstream 124649 9909669 ~ 9941835 (-)
G112076 LOC105018850 other downstream 4330 9779011 ~ 9780455 (-)
G112066 NA other downstream 23120 9761300 ~ 9761665 (-)
G111955 NA other downstream 149655 9634537 ~ 9635130 (-)
G111855 NA other downstream 344847 9439362 ~ 9439938 (-)
G111659 NA other downstream 716723 9067612 ~ 9068062 (-)
G112491 LOC106584755 other upstream 433132 10184147 ~ 10296999 (-)
G112567 NA other upstream 561451 10346471 ~ 10346935 (-)
G112928 NA other upstream 785422 10570442 ~ 10570808 (-)
G112965 NA other upstream 863245 10648265 ~ 10718658 (-)

Expression



Co-expression Network