LOC118937786


Basic Information

Item Value
gene id LOC118937786
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15820843 ~ 15826530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035208.1
GGAACGCCATCCCTCCAGCAAGTGGAGTGGTATGCGCGTGTCAAATTTGAAGTAGACTAGAGGCGGAGAGGGTATAGGACTGCACGCGTCGGTAGATAGCAGTGGGACTAGAGCACATACCGGGCACGGTACCAAAGGATACACCTACCACGTTGGTTTCAAAACATCAGGATTCGAAAAAGttgcaATGAAGGACGTGTGTTTCCAGTGTTATCACACAAAATGCCCAGAGGTGGCCATATTttatgatcttaatggtgatctGAACAAGAATCTGCTGGTGCCAGGCCCTTTCCAGAAATGCACCTCCACTCCCTATCCTCCATCTGGGAAGTGCACCATGTGTCTCCAGGATAATTATTCTTATGCTTTGTGCAGAAGTGTGTCAGAGAGTCTCCAGCCTGCCCTGGAGGCCAATAGAACTGCCGTTACCAACTATAAACAAACCAATTGCTCTGTCATTGGCATCGCGTCAACTACTGTGAATGGTCCAGACTTCACTGGAGCTGGTGGTCAAAACGGACATCCTGGGGGTGAACTGTGGTGGTGTTTACTGATCCTCGTCCTGGTCGTCATTTGCATTGGCATTGGCATTGGCATTGCTTACTGGTGTATCAAGAAGCGCAAAATAAATAGAAACCATGTCGTATAAGGGAGAAAGTGACAGGGACAGCCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGTACAACCCTCAGGACTACCCATCCCTTAACCAAGCTGTTTGGACCAAACCACCAGAGACACGGACAACCCTCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035208.1 True 1983 mRNA 0.51 7 15820843 15826530

Neighbor

gene id symbol gene type direction distance location
znf687a LOC106575274 coding upstream 19072 15787793 ~ 15801771 (+)
LOC110535991 LOC100194679 coding upstream 33424 15783609 ~ 15787419 (+)
LOC110535970 LOC106575371 coding upstream 37842 15759949 ~ 15783001 (+)
ecm1b ecm1 coding upstream 65548 15742330 ~ 15755295 (+)
LOC110535950 LOC106575322 coding upstream 91280 15701186 ~ 15734894 (+)
LOC110536080 LOC106575458 coding downstream 197218 16023748 ~ 16035989 (+)
LOC110536089 LOC106575512 coding downstream 282281 16108811 ~ 16117559 (+)
chrnb2 LOC106575520 coding downstream 307240 16133770 ~ 16173038 (+)
LOC110536177 LOC100286671 coding downstream 463615 16290145 ~ 16298549 (+)
LOC110512627 efna3 coding downstream 689551 16516081 ~ 16667428 (+)
G116416 NA non-coding upstream 3864 15816438 ~ 15816979 (+)
G116368 NA non-coding upstream 121182 15699413 ~ 15699661 (+)
G116340 LOC106575260 non-coding upstream 171728 15644897 ~ 15649115 (+)
LOC110535866 gtpbp10 non-coding upstream 205889 15482391 ~ 15614954 (+)
G116429 NA non-coding downstream 12096 15838626 ~ 15840462 (+)
G116442 NA non-coding downstream 39392 15865922 ~ 15866182 (+)
G116446 NA non-coding downstream 42108 15868638 ~ 15868837 (+)
G116454 il6ra non-coding downstream 53354 15879884 ~ 15917888 (+)
G116464 NA non-coding downstream 77119 15903649 ~ 15919088 (+)
LOC110535842 LOC106605985 other upstream 369155 15448845 ~ 15451856 (+)
LOC110535783 LOC106606004 other upstream 454054 15355848 ~ 15368210 (+)
G116224 NA other upstream 483141 15337430 ~ 15337702 (+)
LOC110535811 acbd7 other upstream 484485 15329572 ~ 15336358 (+)
G116207 NA other upstream 549234 15271202 ~ 15271609 (+)
G117048 NA other downstream 357156 16182890 ~ 16185784 (+)
LOC110536275 s10i other downstream 1169180 16995630 ~ 16998361 (+)
G117704 NA other downstream 1223602 17050132 ~ 17050839 (+)
G117714 LOC106605886 other downstream 1246671 17073201 ~ 17073701 (+)
LOC110520798 fam189b other downstream 1573483 17395343 ~ 17421816 (+)

Expression


Co-expression Network