LOC110486970 (metl6)


Basic Information

Item Value
gene id LOC110486970
gene name metl6
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31357834 ~ 31360219 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558844.2
CGTAACCAAACACTGTTCCCACACGGACGAAGAAGACTACATGCCACACGAGAAATCTTAGAACATTTCTGGAACATTTGCGTTCATAAACAATGTATGTGGAAATATTCCCTGCATTTTCATTAAGTCTATCACTATAATGTGTTAGTACCATCCATTAACATTAGCTGGATAATTTAATGTGGATTGGTGAAATAATATATTTGAGGGTGTCAAGGAAGTGCTGCTATAAGCTACTATCGTAAACTACAGTAGTGCAAGTTATGGCACTATCAAAGCAAGACGACACCTCCAATGTTGTACTTCCTGGAGAGGAACCCAAAGACGTGTTGCCATGTCTTATCCCACCTGTCCAAAGAAAAACATGCACTGGCAGGAATTTGaatgagaaagagatggagaaactgACAGGTGACCAGACTTTGGTGTCTGACTTCAAGCAGATGAAGTTGGAAAAGGAGGCACAGAAAAACTGGGACTTGTTTTACAAAAGGAACACAACAAACTTTTTCAAGGATAGGCATTGGACCACCAGAGAGTTTGAAGAACTAAAAGTGTGCCTTGAGTTTGAAGTCCAGAAGCTGGTCCTGCTTGAAGCTGGCTGTGGGGTTGGGAACTTCATCTTCCCACTACTGGAGGAAGACCTCAACATCTTTGTCTATGCCTGTGACTTCTCACCACGAGCTGTGGAGTTTGTGAAGGAACACTCCCTGTACTGCACTGAGCACTGCAGTGTGTTCCAGTGTGACCTGACAAAGGATGACCTGAGGGGTAATGTCCCAGTGGGCAGTGTGGATGTAGCCACGCTCATATTTGTCCTCTCAGCTATCCACCCAAACAAGATGCAGCAGGCTCTGGACAACATTTACAGGGTCCTGAAGCCAGGGGGCATCATACTGTTCAGGGACTATGGCCTGTATGACCACGCCATGATGAGGTTTAAGGCGGGAAACAAACTGGGAGAGAACTTCTACGTCAGACAGGATGGCACCAGGTCTTATTTCTTTTCCAAAGAGCTCCTAGCAGACCTGTTCAGAGGGGCGGGGTTCGAGAGTGTAACCAATGAGTACGTGCTACGAGAAACGGTCAATAAGAAGGAGGGGCTTTGTGTGCCCAGGGTGTTCCTTCAAAGCAAGTTCCGAAGGCCAGACCAATTACAGGGCTCCTGAAGTCCCTTTCCTCAAAACCTTCAAAGAAACCTTCAAAGGCACAAATGGACTGAGACCTTCATATATAAATGGATCATTGGACAAAAGCCTACACTGCCGTATTGCTGATTAAGTGCCGTTTGTTTGAATATGCTTTTTTATTAATAAaactggtggaaaaagta

Function

NR:

description
methyltransferase-like protein 6

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558844.2 True 1333 mRNA 0.45 5 31357834 31360219

Neighbor

gene id symbol gene type direction distance location
LOC110486940 LOC106605354 coding downstream 5202 31317605 ~ 31352632 (-)
pkdc LOC106605355 coding downstream 57858 31298133 ~ 31299976 (-)
herpud2 LOC106605359 coding downstream 108961 31231353 ~ 31248873 (-)
LOC110486868 LOC106605361 coding downstream 158593 31196917 ~ 31199241 (-)
LOC110486852 LOC106605360 coding downstream 161659 31192419 ~ 31196292 (-)
LOC110486958 LOC106605352 coding upstream 6110 31366329 ~ 31388549 (-)
LOC118936732 bbs9 coding upstream 114675 31474894 ~ 31567154 (-)
LOC118939115 NA coding upstream 209002 31568460 ~ 31576243 (-)
trnap-agg-2 NA coding upstream 216569 31576788 ~ 31576859 (-)
LOC110486984 nt5c3 coding upstream 217226 31577445 ~ 31590842 (-)
G132118 NA non-coding downstream 60524 31297028 ~ 31297310 (-)
G132117 NA non-coding downstream 61884 31295588 ~ 31295950 (-)
G132095 LOC106581260 non-coding downstream 81882 31272373 ~ 31275952 (-)
G132090 NA non-coding downstream 88454 31269175 ~ 31269380 (-)
G132053 NA non-coding downstream 99715 31255914 ~ 31258119 (-)
G132153 NA non-coding upstream 34775 31394994 ~ 31395214 (-)
G132174 NA non-coding upstream 70979 31431198 ~ 31431553 (-)
G132180 NA non-coding upstream 78142 31438361 ~ 31438655 (-)
G132181 NA non-coding upstream 78965 31439184 ~ 31439452 (-)
G132184 NA non-coding upstream 110162 31470381 ~ 31470622 (-)
trnae-cuc LOC106605367 other downstream 458270 30897026 ~ 30899564 (-)
c2h8orf37 cssa05h8orf37 other downstream 461851 30889693 ~ 30896340 (-)
LOC110486376 LOC106605451 other downstream 1479266 29859575 ~ 29878744 (-)
G132197 NA other upstream 175828 31536047 ~ 31543009 (-)
LOC110486999 prdm1 other upstream 275101 31631886 ~ 31648795 (-)
LOC110514821 NA other upstream 1378610 32738829 ~ 32756992 (-)
G134102 NA other upstream 1387989 32748208 ~ 32788121 (-)
LOC110487618 LOC100380645 other upstream 1852445 33208500 ~ 33225125 (-)

Expression


Co-expression Network