G132197


Basic Information

Item Value
gene id G132197
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31536047 ~ 31543009 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU152311
atcgaggcaaagggtggctactttgaagaatctctcaaatatatttggatttgtttaacacttttttggttaccacatgattccatatgttttattttatagttttgatgtcttcactattattctacaatgtatgagtaggtgttctaaaacctttgactggtagtgtatgtaaAGTGAGTCTTATCTGATGGTCCTGCTTCGTGGAGAGAATTTTAGCGTACAGCAGAGAGGCTTTGAATGGATTGCTCTAACAGACCCTACACGGAGATGTGACCTAAGTCTTGACCCCAAAAAGTCAAAGGTGGCCATTTAGCGCCCTGCTGATCTTCACCCGAGATCCCTAATGGGTCTCTGCAAGTGTCAGTAtgtgccccccccacacacaccctaacacTAAAACACTACACCGTTTAATACTCttgcacacactctctcacacacatgcacaaacattcTCTCTTTTACAGTCTCTTTCACAGTCTCACAcatgtctcacacacacaatgattctctCAGTGGAGCGCACACACGCTTTGCACCCCAAACACCCTCAACACActttccctctctgctctcaGTGTGTGATGTGCATTACCCTGCCGACCCTTCTTGACCCGTCTTCTCCCAGGGGTGGGTGGCCGAGGTCACCTAAGGTCAAAGCGAAATGTCTTCCGCTTAACTCAGGCCCTGAGGGAAGGAGCGAGTGTGAGAacgaaggagaggggggaaggagataCGAGGGGGATTTGTGTCCTGTTcctttgttgttattgttgttctaCGCTGGGCGCTAATGGTGTGGTAACACTTAGACTGTCTGGTCACTATTTGCTCGCGGGGTCGAGGGGTTAAAAGCAAGCCTGCCCCCGTTTTtgaaaaggagagtgatggagggagagggctCGTCACGCTGTCATAGCGTCTGACGGAGCGCAGAGAAAGTGCCGGCCCTTTTGGcttctctgcctcttctcccACTCCTTTCTTTTTCTTCCTTTGACGCTCTCTCCCCTCGTAATCTGTTTCTTCCTTTTTTCCTCCACTCAGCCaccgtctctcctcctctgtggcGTTGTGTGTGCTCATGTTGAGGATTCTTGTCTGACGTTTTGACTGCCTCCATGTATAGTAGAagggtgttggtgttggtgctacAGAACACACTAGCCTCCTGGGCCCCATGTCAGCAGGAAGAGCCAGGGACAGAGAAGAATACaacgagagagatggagaagagggaAACAAACGACCTGCCAACCTGCACGCAATTTGAGGTCAAAGTACGCTGGTGTGGTGGCGTTCTCTGCCTTCCTGAACGGGCCATATCCACCAACAGACCTGACAGGAGACGTGGTCGTATCTTACAGCTCTCCTTTCTACAACCTGTCGGAAACATATCACACTTGCCTCATCTCTCTCATGAATTGTTGCTTTTACGTTTCCCTGCCTGTGACTTATCTTACGTCCACAGACGTCTGTCTGTAACAGCTCTGACATCTGGCTAACAGTACTGACGTGTGTCTGTTACGAGATGGACTGAGAGTTACTACCGCTGATCGTTGGCTGTAACAGTACTGACATCTGGCTAACAGTACTGACGTGTGTCTGTTACGAGATGGACTGAGAGTAACACCGCTGATCGTTGGCTGTAACAGTACTGACATCTGGCTAACAGTACTGACGTGTGTCTGTTACGAAATGGACTGAGAGTTACTACCGCTGATCGTTGGCTGTAACAGTACTGACATCTGGCTAACAGTACTGACGTGTGTCTGTTACGAGATGGACTGAGAGTAACACCGCTGATCGTTGGCTGTAACAGTACTGACATCTGCCTGTAGCAGCTCTGTACCCTTTAAAACCACTGAATGGGTAACAGAGGACTGAACTGTATCCCTCGAAGCATCTGGTTCACGGCAGTATGTGTTTCTGGAAGACATTACTCTCCCCTCTAACCAACAAAACCCCTCTTTATTTAAATTAAAATGTCATGGGGTTTTATTATTTCATTTGATTCAAAGCGTCTCACAAAAAAAGCGGCATTTGTACTATTGTTTCCATTGGACTGTCTGTGTTGGCAGCGCCTTGTGGAAAGGTTCCCTGAAAGCACATTAAATGTGAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU152311 True 2126 TUCP 0.47 2 31536047 31543009

Neighbor

gene id symbol gene type direction distance location
LOC110486958 LOC106605352 coding downstream 147498 31366329 ~ 31388549 (-)
LOC110486970 metl6 coding downstream 175828 31357834 ~ 31360219 (-)
LOC110486940 LOC106605354 coding downstream 183415 31317605 ~ 31352632 (-)
pkdc LOC106605355 coding downstream 236071 31298133 ~ 31299976 (-)
herpud2 LOC106605359 coding downstream 287174 31231353 ~ 31248873 (-)
LOC118939115 NA coding upstream 26212 31568460 ~ 31576243 (-)
trnap-agg-2 NA coding upstream 33779 31576788 ~ 31576859 (-)
LOC110486984 nt5c3 coding upstream 34436 31577445 ~ 31590842 (-)
dctn3 LOC106605350 coding upstream 49137 31592146 ~ 31595728 (-)
LOC110486999 prdm1 coding upstream 88877 31631886 ~ 31648795 (-)
G132212 NA non-coding downstream 43377 31492467 ~ 31492670 (-)
G132189 NA non-coding downstream 58331 31477272 ~ 31477716 (-)
G132188 NA non-coding downstream 59451 31476289 ~ 31476596 (-)
G132184 NA non-coding downstream 65425 31470381 ~ 31470622 (-)
G132181 NA non-coding downstream 96595 31439184 ~ 31439452 (-)
LOC118936732 bbs9 non-coding upstream 11449 31474894 ~ 31567154 (-)
G132246 atg5 non-coding upstream 54388 31597397 ~ 31604712 (-)
G132248 NA non-coding upstream 75028 31618037 ~ 31623113 (-)
LOC110486868 LOC106605361 other downstream 337235 31196917 ~ 31199241 (-)
LOC110486852 LOC106605360 other downstream 339755 31192419 ~ 31196292 (-)
trnae-cuc LOC106605367 other downstream 636483 30897026 ~ 30899564 (-)
c2h8orf37 cssa05h8orf37 other downstream 640064 30889693 ~ 30896340 (-)
LOC110486376 LOC106605451 other downstream 1657479 29859575 ~ 29878744 (-)
LOC110514821 NA other upstream 1195820 32738829 ~ 32756992 (-)
G134102 NA other upstream 1205199 32748208 ~ 32788121 (-)
LOC110487618 LOC100380645 other upstream 1669655 33208500 ~ 33225125 (-)
G134668 NA other upstream 2322479 33865488 ~ 33865937 (-)

Expression


Co-expression Network