dctn3 (LOC106605350)


Basic Information

Item Value
gene id dctn3
gene name LOC106605350
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31592146 ~ 31595728 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001165192.1
GTCCTACGTCGTTACAAGGATCCAAATCCATTTGTTGTGCTCTCTGAATCAAGAATGGATAGGAAAGTTGAAGTGGATAACCTCGAAACGCGTCTTGAGACGCTGGAAAGTCGTATATACGGTGAAAGAAGGAACAAGGGAGGGAAACCCATGAAGTGCGCGGATTCCCTCTCCAGAGTTCAGGCCGCCCTTGCAAACACTGCAAATAAGAGGGAACGAGTGAAGATTCTACACAAAAAGATTGAGGACCTGCTGAAGTATCTGGACCCTCAGTTCACTGACCACATCACTGTTCCTGATGCCATGAAGCTGGAATTCATCCTGGCTGAGGAGGACTTCCTGCTTTCCCAGGCCACCCTTCTGGAGCAGGTCAGCAACCTCCAGCCACTATTGGACAGCAACTACATCAGAGATGTGCCAGAGCATGCCACCAAGCTACAGCGTTTGTCTCAGATTCACATCAAAGAGCAGGACCAAACTGAAGCCCAGTCCCTAGAGGTTAAGAAACTGTTTGAGGAGTACAACAAAATGATGTTCCTGCTGTCCAAGCAGTTCACCCAGTGGGATGAGAGCCTGCGGAAAGTGGAGGAGGCAAAGGGCATCCGTCAAGTGGAGTAGCGACCATGTTCAGTGATGACTGTAATGACAGTGTCACGGCATGATGTCATCTGTGTGTCAAGGGTCCTATATGCAGCTTAATGTAACTTACTGGGTATTATTTATTTACAGCTACATCAGAGACATTTGcttagttttaaaaaaaaacattttttatcctTGTTCATTTATTCAACATACAATGTACCCATGCATTCCAATTGTGCAACACTGCTCCAGGCAGTCACAAGACACTGCTTTTTTTCTGGGTCGGTTGACAGTAGAAGAGTGTAGAGAAGAATTTGCACTAACTTTCTTCTTCCACGAAGTCCTGGTTTTAAACAGTTTCATCAGACCGCATGACCGCAAATGTAAAGTAATTGCAATAAAATCCATACTAT

Function

NR:

description
PREDICTED: dynactin subunit 3-like

GO: NA

KEGG:

id description
K10425 DCTN3; dynactin 3

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001165192.1 True 998 mRNA 0.45 7 31592146 31595728

Neighbor

gene id symbol gene type direction distance location
LOC110486984 nt5c3 coding downstream 1304 31577445 ~ 31590842 (-)
trnap-agg-2 NA coding downstream 15287 31576788 ~ 31576859 (-)
LOC118939115 NA coding downstream 15903 31568460 ~ 31576243 (-)
LOC118936732 bbs9 coding downstream 24992 31474894 ~ 31567154 (-)
LOC110486958 LOC106605352 coding downstream 203597 31366329 ~ 31388549 (-)
LOC110486999 prdm1 coding upstream 36158 31631886 ~ 31648795 (-)
LOC110487017 LOC106605347 coding upstream 169473 31765201 ~ 31777787 (-)
LOC100136303 LOC100136303 coding upstream 261966 31857694 ~ 31883061 (-)
LOC118939268 NA coding upstream 271369 31867097 ~ 31871227 (-)
LOC110534727 LOC106581127 coding upstream 293302 31889030 ~ 31892905 (-)
G132212 NA non-coding downstream 99476 31492467 ~ 31492670 (-)
G132189 NA non-coding downstream 114430 31477272 ~ 31477716 (-)
G132188 NA non-coding downstream 115550 31476289 ~ 31476596 (-)
G132246 atg5 non-coding upstream 1669 31597397 ~ 31604712 (-)
G132248 NA non-coding upstream 22309 31618037 ~ 31623113 (-)
G132278 NA non-coding upstream 76499 31672227 ~ 31672676 (-)
G132279 NA non-coding upstream 81738 31677466 ~ 31677739 (-)
G132197 NA other downstream 49137 31536047 ~ 31543009 (-)
LOC110486868 LOC106605361 other downstream 393334 31196917 ~ 31199241 (-)
LOC110486852 LOC106605360 other downstream 395854 31192419 ~ 31196292 (-)
trnae-cuc LOC106605367 other downstream 692582 30897026 ~ 30899564 (-)
c2h8orf37 cssa05h8orf37 other downstream 696163 30889693 ~ 30896340 (-)
LOC110514821 NA other upstream 1143101 32738829 ~ 32756992 (-)
G134102 NA other upstream 1152480 32748208 ~ 32788121 (-)
LOC110487618 LOC100380645 other upstream 1616936 33208500 ~ 33225125 (-)
G134668 NA other upstream 2269760 33865488 ~ 33865937 (-)

Expression


Co-expression Network