LOC110501508 (LOC106605132)


Basic Information

Item Value
gene id LOC110501508
gene name LOC106605132
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37442359 ~ 37463839 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947585.1
gagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagacccagcggACAGAAGCAGCGGAAGGAGGGAAGCAGCAGGGaggagcagcaacagcagcagcggcGGCAGAGTGATCCACCTGTCACAGAGTGGAAGGGGCCCCCCGCCTGATCCGTCTGCCTGCAGGGGGGACCCCGCGTGGCCGGTCAGCACCAGGGACTATGCAGCTgggactggtggctctggcgatGGTCTTTCTCGGATCCATGGGTCACAGCGACAGCGGCCTCAAGCTCTCAAAGGGACGGAGGCAGAGACGGATTAGCACTGAGGGGCCACCATCTTGCTCAAATGGCTGTGAGCGATGTTCCGAATACAATGGCTGTATAAAATGTAAGCCCAAACTCTTCATTCTCCTGGAGCGCAACGACATCCGCCAGATAGGCGTGTGCCTCGCCTCGTGCCCACAGGGATACTTCGGCATGCGGACTCCCGATACCAACAGATGCATTCAATGTAAAATAGAGAATTGTGAGGAGTGTTTCAATCGAAATTTTTGCACAAAATGTAAGGAGGGCTTATATTCACACAGAGGGCGATGCTACCCCAGCTGCCCTGAAGGCCTCAGCACCACCAACGGGACCATGGAGTGTGTAGAATGTGAACTGGGCGAATGGAGCCCATGGGGTCCCTGTATGAAGAAGAACAAGACGTGTGGCTTTAAGAAAGGCACACAGACCAGAATGCAAGAGCTTCTTCATGCCTCCAGCACTGACACAGTCTCTGCGTCATCCCCCCGGCCATGTGCTccacagactgagagacagaagTGCACAGTGCAGAAGACACCATGTGGAAAAGGAGATGGGAATAAGAATAAGGGCGAGCGACGAGACCAGCAGAGGAGGCGAGACAAAGAAAACGTCAGAGGCCATGGCAAAGAGGGTGGCAAAGAGGGTGGCAAGAAGGGTGGcaaagagggaggaaaagaaggaagcagagagggggtcaaagagggaggaaaaggaggaagagagggtggcAAGGGAGGCGGCAGGAGGAAAAAGGGCCAAAACCAGGCCACCTCCGCGCCCAGCCTTACCCCTAGCACTGTAGCCTAGGCCTTACTCACGTTGGGACTTAGTGGGGACAAGGAGGGACAAAAACAAGGCGACTAGGCAACACCCACCTGCATTGGCCATTATtaagagacagacagtggacagaggaGACAATATCAAACTGATGAAGAAAAGGATTAATGCTGCTATGCATTCTAGAAGATGCTCTAAGAGAACTGGAGGATTGCTGCAATAAATGAGGATCAGGACTTGAGACTTATCAGACTTGGAGGGAAGAGGGTGAATGTGCAATGTGGAGGGTTCCACTGTAAGCCTTGCAGTAGGGTCAACATGTTTCATTTCACCGCTCCCAGGTTTATCATGGAGTTGGCAGATGGAGATCCCAGTGGCTGAACAGTGGAAGACACTGAATATGAATATGAGAGTTTCAAGATGGAGTCTTCACAATGATCAAGGATATCTACAATCCATTAGAATCCCTGATGTGCTTTTCAAAATCTATTTTTCATTGTTGACGACTCATGTTTTGTGAATGGTAGCAAGTAGATATTTCTAAGGAGATGTTGTTGTAAGTGATATAGAGAAAATGAACAGTATTAAAATTCTTTATTTTAATTATATTTTATGATTAAACAAAAGAAAGGCACTGGAACAAATGTGTGGTTTTGAAGGAAAACACATTTTAATGACATTTTTGGTTAGTAGAGAATCTACTCCAAAACAAACCAGCAACAATATAGAGAAGGTTTATACAGCTTTAGTTCAAATCCTGATCTGGTGTTAGACAAAGGTTACCCACATAATAGCTTAGTGCTTAATTTCAAATAGAATAATGTTTTgctatcatcagcataaaaagtTTAGGATTGAAaactgtgtgttgtgtatgtgtgttgtgagtatgtgtgcgtgtgtctgtgtgtgcattcgTGCCTGTCTGTAATGTTACAGAATTTCAGCAAAATGTTTTTGTGAAGTAGTGGTCACACAAGTGTATGTATATTTGTGTGGGTATATTGTATGTGTTTTTGCACATAagcttaatgtgtgtgtgtacgtatcaATCTGGTAGAATGGGAAAttttatataaactcagcaaaaaaatgtccctttttcaggaccctgtctttcaaagataattcgtaaaaatacaaataacttcacagatcttcattgtaaagggtttaaacacagtttcccatgcttgttcaatgaaccataca
>TU159561
GGAAGGAGGGAAGCAGCAGGGaggagcagcaacagcagcagcggcGGCAGAGTGATCCACCTGTCACAGAGTGGAAGGGGCCCCCCGCCTGATCCGTCTGCCTGCAGGGGGGACCCCGCGTGGCCGGTCAGCACCAGGGACTATGCAGCTgggactggtggctctggcgatGGTCTTTCTCGGATCCATGGGTCACAGCGACAGCGGCCTCAAGCTCTCAAAGGGACGGAGGCAGAGACGGATTAGCACTGAGGGGCCACCATCTTGCTCAAATGGCTGTGAGCGATGTTCCGAATACAATGGCTGTATAAAATGTAAGCCCAAACTCTTCATTCTCCTGGAGCGCAACGACATCCGCCAGATAGGCGTGTGCCTCGCCTCGTGCCCACAGGGATACTTCGGCATGCGGACTCCCGATACCAACAGATGCATTCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947585.1 False 2308 mRNA 0.46 5 37442359 37463839
TU159561 True 435 TUCP 0.48 2 37460874 37463758

Neighbor

gene id symbol gene type direction distance location
LOC110488968 LOC106605134 coding downstream 104752 37332647 ~ 37337607 (-)
LOC110533765 NA coding downstream 169384 37264176 ~ 37272975 (-)
LOC110488943 LOC106582967 coding downstream 516477 36922102 ~ 36925882 (-)
pnrc2 LOC106605140 coding downstream 592986 36844929 ~ 36849373 (-)
LOC118939565 NA coding downstream 901161 36487954 ~ 36541198 (-)
LOC118939571 NA coding upstream 146 37463985 ~ 37476762 (-)
LOC110489008 LOC106604987 coding upstream 313565 37777404 ~ 37782182 (-)
LOC118939581 LOC106604987 coding upstream 327400 37791239 ~ 37796388 (-)
LOC118939584 c3-1 coding upstream 341170 37805009 ~ 37806792 (-)
LOC110489018 LOC106597357 coding upstream 342920 37806759 ~ 37810055 (-)
G138713 NA non-coding downstream 30274 37411227 ~ 37412085 (-)
G138661 NA non-coding downstream 110061 37332047 ~ 37332298 (-)
G138659 NA non-coding downstream 110791 37331037 ~ 37331568 (-)
G138651 NA non-coding downstream 127040 37315067 ~ 37315319 (-)
G138646 NA non-coding downstream 135571 37306567 ~ 37306788 (-)
G138760 NA non-coding upstream 747 37464586 ~ 37465893 (-)
G138780 NA non-coding upstream 33573 37497412 ~ 37497701 (-)
G138783 NA non-coding upstream 37078 37500917 ~ 37501223 (-)
G138940 LOC106583027 non-coding upstream 170538 37634377 ~ 37635070 (-)
G138080 NA other downstream 613962 36825792 ~ 36828397 (-)
G137839 LOC106605146 other downstream 803354 36634193 ~ 36639005 (-)
G137479 NA other downstream 1072031 36370004 ~ 36370328 (-)
drd2l LOC106582624 other downstream 1766654 35674291 ~ 35700846 (-)
G139231 NA other upstream 283602 37747441 ~ 37752958 (-)
LOC110489105 LOC106605178 other upstream 582863 38046700 ~ 38048666 (-)
G140479 NA other upstream 1364070 38827909 ~ 38828195 (-)
G140879 NA other upstream 1600023 39063862 ~ 39064418 (-)
G141363 LOC106605077 other upstream 2300094 39763933 ~ 39765473 (-)

Expression


Co-expression Network