G138659



Basic Information


Item Value
gene id G138659
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37331037 ~ 37331568 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU159472
atgatctctggaTGTGTGATTCGCACTGTGAATCATGGAAGAagaggtgtggaggtgctttgctggtgacactgtgatttattcagaattcaaggcacacttaaccaacatggctaccaccgcattctgcagcgatatgccatcccatctggtttgtgcttagtggcactatcatttgtttttcaacaggacaatgacccaacaaacctccaggctgtgtaagggctatttgaccaataagaagagtgatagagtgctgcatcagatgaactggccttcacaatcacccgacctcaacccaattgagatggttagggatgagttggaccgcgagtgaaggaaatgcagccaacaagtgctcagcatatgtggaatcTCCTTCCAAGACTGTTGGGTAAAGCATTCcaggggaagctggttgagagaatgccaagagtgtgcaacgctgtcatcaagtcatgggtggctactttgaagaatctcaagtataaaatatattttgatttgttacttttttcactattattctgca

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU159472 True 532 lncRNA 0.44 1 37331037 37331568

Neighbor


gene id symbol gene type direction distance location
LOC110533765 NA coding downstream 58062 37264176 ~ 37272975 (-)
LOC110488943 LOC106582967 coding downstream 405155 36922102 ~ 36925882 (-)
pnrc2 LOC106605140 coding downstream 481664 36844929 ~ 36849373 (-)
LOC118939565 NA coding downstream 789839 36487954 ~ 36541198 (-)
LOC110488840 LOC106605148 coding downstream 975247 36299063 ~ 36355790 (-)
LOC110488968 LOC106605134 coding upstream 1079 37332647 ~ 37337607 (-)
LOC110501508 LOC106605132 coding upstream 110791 37442359 ~ 37463839 (-)
LOC118939571 NA coding upstream 132417 37463985 ~ 37476762 (-)
LOC110489008 LOC106604987 coding upstream 445836 37777404 ~ 37782182 (-)
LOC118939581 LOC106604987 coding upstream 459671 37791239 ~ 37796388 (-)
G138651 NA non-coding downstream 15718 37315067 ~ 37315319 (-)
G138646 NA non-coding downstream 24249 37306567 ~ 37306788 (-)
G138484 NA non-coding downstream 44556 37286240 ~ 37286481 (-)
G138472 LOC106605135 non-coding downstream 53018 37274620 ~ 37278019 (-)
G138433 LOC107717746 non-coding downstream 112374 37217954 ~ 37218663 (-)
G138661 NA non-coding upstream 479 37332047 ~ 37332298 (-)
G138713 NA non-coding upstream 79659 37411227 ~ 37412085 (-)
G138760 NA non-coding upstream 133018 37464586 ~ 37465893 (-)
G138780 NA non-coding upstream 165844 37497412 ~ 37497701 (-)
G138080 NA other downstream 502640 36825792 ~ 36828397 (-)
G137839 LOC106605146 other downstream 692032 36634193 ~ 36639005 (-)
G137479 NA other downstream 960709 36370004 ~ 36370328 (-)
drd2l LOC106582624 other downstream 1655332 35674291 ~ 35700846 (-)
G139231 NA other upstream 415873 37747441 ~ 37752958 (-)
LOC110489105 LOC106605178 other upstream 715134 38046700 ~ 38048666 (-)
G140479 NA other upstream 1496341 38827909 ~ 38828195 (-)
G140879 NA other upstream 1732294 39063862 ~ 39064418 (-)

Expression



Co-expression Network