ric8a (ric8a)


Basic Information

Item Value
gene id ric8a
gene name ric8a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93068836 ~ 93084885 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577034.2
TCATCGCTGGTTTTTGAGTTCCAGGATCAGAGCCGAGTGACTATCACACAGAGTCATATGTGCATATAGCTATCAGTACGGTAGAGCCCTGTACATGACATCCGCGAGGCGCTAAACATTCGGGTGGACAGGGAACACAACAAAAATGAACATGGATTTAAATGACATAATAGAAAACATGGAAACGGGTGATCAAGATGCCGCATTGATGGCACTGCAGACGTACAATAAAAAGATGACCCAGTGCTTCACATTTACCACAgatgaagaggagcagagagagAGGTTAGGAGAGCTAGTGCTGGGCTTCCTGGAGCGAGACCTCCAACCGTCCTGCCAGCTTGCCTGTCTGGAGACCATCCGCATCCTGTCACGTGACAAGAACAACGTGGCACCCTTCATCACGCACACCGCCATGCAGACCCTCAGCCGGCACGCTGGCATCGCAATCTCCCACGGCAACGTGGACTGCGAGGGCGATGTGGTCCTCGTCCCTTTCGTTGAGAACCCGGACCTGGAGATTATCGTAGAGGCGCTGAAGAGCATCTGCAACATCTGCTTGCACAACAAGGTGGCTGTGCAGGTGGGCCAGGACTTGCAGCTGATTGTTGGCATCGCGGAGCGTCTCAAGCAGTGTGGCGAGGACCAGTGGAACCACTACGTAAGGTTCTTCGACCTGCGCCTCATGTTCCTTCTCACCGCCCAGCGTGTGGCGATGCGAACCCAGCTGTTGAGGGAGTTGCGGGGGGTCAGTCTGCTGTCCAACCACCTGGATGCTACATTGGGGCTGTGTTGGCCTGATACCTTCGAGGTGGGGCGGGCCGGGGTGGAGGTCGATCCGGACTCTGAGGAACCGACCGAACTGCCCCCACTCAGCCGGGAGAAGATCGAGAGAGCCATGGAGATCCTCAAGATCCTCTTCAATATCACCTACGATGCCAACCGGCGGGAGGTGGACGAGGAGGAGGCAGCGGCGTTCAGACACCTGGGAGCCATCCTTAGACACTGTCTGATGAGCAGCGCTGACGCACAGGACGACACAGAGGAGTTTCACAGtcattCACTGAACCTACTGGGGAACCTCCCTCTGTCCTGTCTGGATGTGCTGCTGATGCCCAAGGTTCAGCAGGGCTCAATAGAATACATGGGGGTCAACATGGACGCCGTCAACATGCTCCTGGAGTACATGGAGAAGAGGCTAGACAGGGGCAAGAAACTGAAGGAGACCATGCTCCCCTCTCTTAACCTGCTGACTGAGAGCGCCCGCATCCACAGGGAGACCAGGAAGTTCCTCAGGATGAAGgtactCCCTCCTCTGCGGGACGTGAAGAATCTACCAGAAGTGGGGAACGCCCTTCGCAACAAGCTTGTTCGCCTGATGACCAACATTGACACTGATGTCAAGAACTGTGCAGCAGAGTTCCTATTCGTCCTGTGCAAAGAAAGTGTGTCCAGGTTCATTAAGTACACAGGCTATGGCAATGCAGCGGGTCTCCTGGCCGCCCGGGGGCTTCTGCGAGGGGGGGGCAACCCAGGCGTCTACTCTGAGGATGAGGACAGTGACACAGAAGAGTACCGTGAGGCCAAATCTCAAATTAACCCTGTGACAGGCAGAGTGGAGGATGAGCAGCCCAACCCCATGGAGGGAATGACAGAGGAACAGAAGGAGCTGGAGGCCATGAAGCTGGTCAACATGTTTGATAAGCTCTCCAGGTCCAATATTATCCAGCCAATGATGCTGGGGATTGATGGTTCGATGACACAGATGAATTCTGGCGACCTGCGACGAATGAGAGACCAGATACCACAGGGACAACAACTACACCTACAAACACAACTACGTCTAGAACCACAACAACAAGAACATAAAAAagaacaacaagatcaacaacaacagcaaggCTCAGGCAGCGAGGACGAGGGGGAGGTAGAATGAATATAATGGACTGTCACCTGTTGTGTAACCTCTGTCACAGGCTCTGAAGCTTATCGGTGCAGGCGGAATCATCATCTGATGTAAGACAATGACTGTGTACTAAAATAGCTACAGTGTTTGAGTAGCATGTGAAATGTTAACTGTCTTTCTTAAGTATATATTAATGTTCTGGGTTGTGATTAACTTCCATCAGTGTGTTTAGGTATGTTTTCTGCCTTTTGTAGGTGAAATACTTTACATATCGGACTCCTTTCACATCAAATGTTGTTTCAAGACTTTAATCTTCTTTACGTTCTCAAAAGACAAAAGTTTCCCTTCATTTGTCCCTGGTTTTGTTTGCATTGTTCTTATACTGAGCAAATTATATTGAAGTTATTTATAGATTAAATTATGAATCCATTAATACTGTTTCAGTAGTTGCATTGTTCTAAACTAGTGATCAGAGAGCCTCAAAATGAAGTATAATATCTGATGATATTATGAGGTGTTTTTCATGTTATGTGATACCTGACATTTTGGGGGATGGGTGATCTTGATATGGTGTGCCACTATGCTATCTCAGTTATGTGCACATTTCAGTTCAGAATGGGAATGAGAAAACAATCTGTTGATTTTAGGTGGTTTCATTGCAATTTAAAGGTTTGATGAAAATAATCCACTTATATATTTACCCTAATTTATATTGTATACCAACTCTAATGTGAGGTTCAGTAAAAATGTTTCAAAAACA
>XM_021577024.2
GCTGGTTTTTGAGTTCCAGGATCAGAGCCGAGTGACTATCACACAGAGTCATATGTGCATATAGCTATCAGTACGGTAGAGCCCTGTACATGACATCCGCGAGGCGCTAAACATTCGGGTGGACAGGGAACACAACAAAAATGAACATGGATTTAAATGACATAATAGAAAACATGGAAACGGGTGATCAAGATGCCGCATTGATGGCACTGCAGACGTACAATAAAAAGATGACCCAGTGCTTCACATTTACCACAgatgaagaggagcagagagagGATGGGAAGTTACAAGAGAGGTTAGGAGAGCTAGTGCTGGGCTTCCTGGAGCGAGACCTCCAACCGTCCTGCCAGCTTGCCTGTCTGGAGACCATCCGCATCCTGTCACGTGACAAGAACAACGTGGCACCCTTCATCACGCACACCGCCATGCAGACCCTCAGCCGGCACGCTGGCATCGCAATCTCCCACGGCAACGTGGACTGCGAGGGCGATGTGGTCCTCGTCCCTTTCGTTGAGAACCCGGACCTGGAGATTATCGTAGAGGCGCTGAAGAGCATCTGCAACATCTGCTTGCACAACAAGGTGGCTGTGCAGGTGGGCCAGGACTTGCAGCTGATTGTTGGCATCGCGGAGCGTCTCAAGCAGTGTGGCGAGGACCAGTGGAACCACTACGTAAGGTTCTTCGACCTGCGCCTCATGTTCCTTCTCACCGCCCAGCGTGTGGCGATGCGAACCCAGCTGTTGAGGGAGTTGCGGGGGGTCAGTCTGCTGTCCAACCACCTGGATGCTACATTGGGGCTGTGTTGGCCTGATACCTTCGAGGTGGGGCGGGCCGGGGTGGAGGTCGATCCGGACTCTGAGGAACCGACCGAACTGCCCCCACTCAGCCGGGAGAAGATCGAGAGAGCCATGGAGATCCTCAAGATCCTCTTCAATATCACCTACGATGCCAACCGGCGGGAGGTGGACGAGGAGGAGGCAGCGGCGTTCAGACACCTGGGAGCCATCCTTAGACACTGTCTGATGAGCAGCGCTGACGCACAGGACGACACAGAGGAGTTTCACAGtcattCACTGAACCTACTGGGGAACCTCCCTCTGTCCTGTCTGGATGTGCTGCTGATGCCCAAGGTTCAGCAGGGCTCAATAGAATACATGGGGGTCAACATGGACGCCGTCAACATGCTCCTGGAGTACATGGAGAAGAGGCTAGACAGGGGCAAGAAACTGAAGGAGACCATGCTCCCCTCTCTTAACCTGCTGACTGAGAGCGCCCGCATCCACAGGGAGACCAGGAAGTTCCTCAGGATGAAGgtactCCCTCCTCTGCGGGACGTGAAGAATCTACCAGAAGTGGGGAACGCCCTTCGCAACAAGCTTGTTCGCCTGATGACCAACATTGACACTGATGTCAAGAACTGTGCAGCAGAGTTCCTATTCGTCCTGTGCAAAGAAAGTGTGTCCAGGTTCATTAAGTACACAGGCTATGGCAATGCAGCGGGTCTCCTGGCCGCCCGGGGGCTTCTGCGAGGGGGGGGCAACCCAGGCGTCTACTCTGAGGATGAGGACAGTGACACAGAAGAGTACCGTGAGGCCAAATCTCAAATTAACCCTGTGACAGGCAGAGTGGAGGATGAGCAGCCCAACCCCATGGAGGGAATGACAGAGGAACAGAAGGAGCTGGAGGCCATGAAGCTGGTCAACATGTTTGATAAGCTCTCCAGGTCCAATATTATCCAGCCAATGATGCTGGGGATTGATGGTTCGATGACACAGATGAATTCTGGCGACCTGCGACGAATGAGAGACCAGATACCACAGGGACAACAACTACACCTACAAACACAACTACGTCTAGAACCACAACAACAAGAACATAAAAAagaacaacaagatcaacaacaacagcaaggCTCAGGCAGCGAGGACGAGGGGGAGGTAGAATGAATATAATGGACTGTCACCTGTTGTGTAACCTCTGTCACAGGCTCTGAAGCTTATCGGTGCAGGCGGAATCATCATCTGATGTAAGACAATGACTGTGTACTAAAATAGCTACAGTGTTTGAGTAGCATGTGAAATGTTAACTGTCTTTCTTAAGTATATATTAATGTTCTGGGTTGTGATTAACTTCCATCAGTGTGTTTAGGTATGTTTTCTGCCTTTTGTAGGTGAAATACTTTACATATCGGACTCCTTTCACATCAAATGTTGTTTCAAGACTTTAATCTTCTTTACGTTCTCAAAAGACAAAAGTTTCCCTTCATTTGTCCCTGGTTTTGTTTGCATTGTTCTTATACTGAGCAAATTATATTGAAGTTATTTATAGATTAAATTATGAATCCATTAATACTGTTTCAGTAGTTGCATTGTTCTAAACTAGTGATCAGAGAGCCTCAAAATGAAGTATAATATCTGATGATATTATGAGGTGTTTTTCATGTTATGTGATACCTGACATTTTGGGGGATGGGTGATCTTGATATGGTGTGCCACTATGCTATCTCAGTTATGTGCACATTTCAGTTCAGAATGGGAATGAGAAAACAATCTGTTGATTTTAGGTGGTTTCATTGCAATTTAAAGGTTTGATGAAAATAATCCACTTATATATTTACCCTAATTTATATTGTATACCAACTCTAATGTGAGGTTCAGTAAAAATGTTTCAAAAACA

Function

symbol description
ric8a Predicted to enable G-protein alpha-subunit binding activity and guanyl-nucleotide exchange factor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human RIC8A (RIC8 guanine nucleotide exchange factor A).

NR:

description
synembryn-A isoform X1

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577034.2 False 2666 mRNA 0.49 11 93068836 93084885
XM_021577024.2 True 2679 mRNA 0.49 12 93068841 93084885

Neighbor

gene id symbol gene type direction distance location
trnap-agg-6 NA coding upstream 1451 93067314 ~ 93067385 (+)
trnap-ugg-6 NA coding upstream 4527 93064238 ~ 93064309 (+)
trnap-agg-5 NA coding upstream 7079 93061686 ~ 93061757 (+)
trnap-agg-4 NA coding upstream 15231 93053534 ~ 93053605 (+)
trnap-ugg-5 NA coding upstream 18449 93050316 ~ 93050387 (+)
LOC110499974 LOC106561627 coding downstream 186070 93270955 ~ 93335518 (+)
LOC110502396 LOC105018284 coding downstream 288422 93373307 ~ 93376905 (+)
LOC118936880 NA coding downstream 538148 93623033 ~ 93624085 (+)
LOC118936881 NA coding downstream 631204 93716089 ~ 93721762 (+)
LOC110500011 LOC106561648 coding downstream 1060778 94145663 ~ 94149467 (+)
G205269 NA non-coding upstream 1832 93048124 ~ 93067004 (+)
G205255 NA non-coding upstream 39728 93028907 ~ 93029108 (+)
G205250 NA non-coding upstream 50732 93017718 ~ 93018104 (+)
G205248 NA non-coding upstream 59010 93009597 ~ 93009826 (+)
G205208 NA non-coding upstream 92992 92975542 ~ 92975844 (+)
G205291 NA non-coding downstream 2378 93087263 ~ 93090300 (+)
G205349 NA non-coding downstream 93639 93178524 ~ 93195314 (+)
G205433 NA non-coding downstream 218772 93303657 ~ 93305171 (+)
G205405 NA non-coding downstream 252269 93337154 ~ 93337714 (+)
G205404 NA non-coding downstream 292850 93371393 ~ 93388550 (+)
LOC110499942 LOC106561637 other upstream 230709 92837196 ~ 92839440 (+)
G204593 NA other upstream 386481 92681346 ~ 92682355 (+)
G204240 ckap5 other upstream 908933 92157275 ~ 92159903 (+)
G203646 cpa2 other upstream 1044094 92021755 ~ 92024742 (+)
G203551 NA other upstream 1221436 91826849 ~ 91847400 (+)
G205482 NA other downstream 316732 93401617 ~ 93402234 (+)
G205683 LOC106573085 other downstream 711197 93796082 ~ 93798936 (+)
G205688 NA other downstream 725475 93810360 ~ 93812169 (+)
G206285 NA other downstream 855601 93940486 ~ 93941471 (+)

Expression


Co-expression Network