LOC118936880


Basic Information

Item Value
gene id LOC118936880
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93623033 ~ 93624085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934440.1
ATGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCAATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCAATGACAATGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCAATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTAGACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCAATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCAATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCGATGACAACGTGTCTGGTCCCCAATGTCACCTACACAACCACGGGCACCTCAATGACAATGTGGCTGGTCCCCAATGTCACCAATTTAACTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562289

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934440.1 True 1053 mRNA 0.56 1 93623033 93624085

Neighbor

gene id symbol gene type direction distance location
LOC110502396 LOC105018284 coding upstream 246128 93373307 ~ 93376905 (+)
LOC110499974 LOC106561627 coding upstream 287515 93270955 ~ 93335518 (+)
ric8a ric8a coding upstream 538148 93068836 ~ 93084885 (+)
trnap-agg-6 NA coding upstream 555648 93067314 ~ 93067385 (+)
trnap-ugg-6 NA coding upstream 558724 93064238 ~ 93064309 (+)
LOC118936881 NA coding downstream 92004 93716089 ~ 93721762 (+)
LOC110500011 LOC106561648 coding downstream 521578 94145663 ~ 94149467 (+)
dnm1l LOC106561645 coding downstream 526346 94150431 ~ 94172796 (+)
LOC110500081 NA coding downstream 639924 94264009 ~ 94268751 (+)
zgc:136858 LOC106561644 coding downstream 646475 94270560 ~ 94300044 (+)
G205599 NA non-coding upstream 8294 93614493 ~ 93614739 (+)
G205594 NA non-coding upstream 19518 93603240 ~ 93603515 (+)
G205586 NA non-coding upstream 29281 93593474 ~ 93593752 (+)
G205583 NA non-coding upstream 32526 93590041 ~ 93590507 (+)
G205561 NA non-coding upstream 46346 93538181 ~ 93576687 (+)
G205650 NA non-coding downstream 101474 93725559 ~ 93726003 (+)
G205665 NA non-coding downstream 133234 93757319 ~ 93757529 (+)
G205684 NA non-coding downstream 172366 93796451 ~ 93798214 (+)
G205706 LOC106561641 non-coding downstream 209430 93833515 ~ 93835840 (+)
G205722 NA non-coding downstream 232576 93856661 ~ 93925170 (+)
G205482 NA other upstream 220799 93401617 ~ 93402234 (+)
G205404 NA other upstream 234483 93371393 ~ 93388550 (+)
LOC110499942 LOC106561637 other upstream 784906 92837196 ~ 92839440 (+)
G204593 NA other upstream 940678 92681346 ~ 92682355 (+)
G204240 ckap5 other upstream 1463130 92157275 ~ 92159903 (+)
G205683 LOC106573085 other downstream 171997 93796082 ~ 93798936 (+)
G205688 NA other downstream 186275 93810360 ~ 93812169 (+)
G206285 NA other downstream 316401 93940486 ~ 93941471 (+)
G206389 LOC106561642 other downstream 476894 94100979 ~ 94101872 (+)
LOC110500139 LOC106561672 other downstream 778506 94391364 ~ 94437682 (+)

Expression


Co-expression Network