LOC110500630


Basic Information

Item Value
gene id LOC110500630
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98803005 ~ 98808340 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578108.2
ACTTGGTAGGGAATATGGTGCGATTTGCCACTGGTCACACAGAGATTGTGTAACCTCCAGACTCCCCAAGTCGTTTTGCGTTTAACAAGGCACTGTTGTAGTAGTGAGGAGGAACCTAACTTACCTTTATGTCACATGTCTGATACCAACAATCAGAGGACACAACCCTACTGGACTGCCTTTCAGTGAGATGTGAATGAATTTTAAGTAGTTGTCTGGGCAGTTGGACAAACTAACACTGATTTGGATTTTAAAGCTGCTTGTGGACTTGGCTGGCTTTGGTTTCACTATGGACAGAAGGATGTATCAACCAACCCTTATCTCATTGGTCGTATTGCTCTTCACCCTGTCCAATATTGTCTACGGGGGTAAAATATTAATCTACCCAATGGATGGAAGCCACTGGGTCAACATGAGAGTCATCATCGAAGAGTTGCATTCCAAAGGCCATGACATCACAGTGGTGCGAGCGTCAAACAGCTGGTACATCAAGGAGAATTCCCCCCACTACACCACCATTACCATCCCCAACACTGGTGGCTTCGATGAAAACTTCTTTGGTGAATTTATATTAAGTAAACATCTGAAGATTCAAAGGGAGCAGGGGAAAAGTTTTTGGACCGAACTCAAGCTTCAGTCATCAATGAAGGAGACTTTTTTCGAGTTCCACAAGAACATGGCTGAAATGATCACTCGTGTCCTTGAAGACAGAAAGTTGATCCAGTCTCTCCAGGATGCTAAGTTTGATTTGGTTCTGACAGATCCTGGGATTGGTGGAGGGACGATCTTAGCCCGTGTCCTCCACCTTCCTCTGGTTTACAATGTCAGATGGACCATTCAAGGTGAAGCTCATTTGGTCATCGCCCCGTCGCCTCTCTCTTACGTCCCATACACACCCACAGAGTTGACAGACAAGATGACCTTCCTCCAGAGAGTCACCAACGTCTTAGCTTACATACTCGGGAGTTACACATTGGCATCTATCACAGAACCCAACTACAAACCGATAGTCCAGCGTTACTTTGGCCCTGACGTCGATTATAACGCATTCTTCCAGGAAGCAGATATCTGGCTCATGAGAAGCGATTTTGTCTTTGAATTTCCGAAACCCACCATGCCGAATATGGTCTACATTGGTGGGTTCCAGTGTAAGCCCTCCAAGCCTCTTCCACAGGACCTGGAGGAGTTTGTTCAGAGTTCCAGCGAGCATGGGGTTGTCATGATGACTCTGGGGACTTTGGTGGCAGAGCTTCCTGAAGATATCGCAGATGAAATCGCTGCCGCGTTCGCTCAGCTGCCTCAGAAGGTCATCTGgagGTATACCGGACAGAGACCCTCTACCCTGGGTAACAACACCCTACTGGTGGACTGGCTTCCCCAGAACAACCTCCTAGGACACCCCAAGACTCGGGCCTTCGTTGCCCATGGAGGAACCAACGGTGTCCAGGAGGCCATCTACCACGGCGTCCCGGTAGTCGGCCTCCCTCTCGCCTTCGACCAGTCCGACAACCTCTCCAAGTTGAAGGAGAGGGGGGCAGCTAACACGGTGGATATCGTCACAATGGACAGAAATGTGTTTCTGGAGGCTTTGAAGGCTGTGCTGCATGAACCGTCCTACAGGGAGAACATGCAGAGGTTGTCCAGACTGCACAGAGACCAACCCATTAAACCACTGGACAAGGCAGTGTTCTGGATCGAGTTTGTTATGAGACATAAAGGAGCTCGTCACCTGAGGACAGAGTCCTATAAGATGTCCTGGATAGTATACCACTCGGTTGATGTGATAGCGACTTTGCTGATGTGTGGGTTGCTTGTAACGCTGGTTTGCCTGGCAGGCGTAAGATGTGTTTGGCGTAAGGTGTTTTGCAGGAACAAAGTGAAAAGTGAATGATAATGTGTTTTGAGATGTGAATATTAAAATATTATCTTATCATTGCTCAATCAGCAATTTATcaataacatttacatttgatcAATAAAACATTGTTTTAGGGTATGTGA

Function

NR:

description
UDP-glucuronosyltransferase 2C1-like

GO: NA

KEGG:

id description
K00699 UGT; glucuronosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578108.2 True 2001 mRNA 0.47 3 98803005 98808340

Neighbor

gene id symbol gene type direction distance location
LOC110500839 LOC105018309 coding downstream 79903 98692756 ~ 98723102 (-)
LOC110502529 LOC106584711 coding downstream 113869 98642990 ~ 98689136 (-)
LOC110500748 LOC106561725 coding downstream 201755 98587916 ~ 98601250 (-)
edc3 LOC106561715 coding downstream 267315 98521998 ~ 98535690 (-)
LOC110500720 LOC106561717 coding downstream 289144 98474734 ~ 98513861 (-)
LOC110502520 LOC105018371 coding upstream 11441 98819781 ~ 98832865 (-)
LOC110500681 scamp5 coding upstream 34097 98842437 ~ 98854773 (-)
LOC118943884 LOC106561728 coding upstream 67734 98876074 ~ 98892143 (-)
LOC110510475 LOC106561728 coding upstream 86800 98895140 ~ 98898124 (-)
LOC118944227 NA coding upstream 100622 98908962 ~ 98909070 (-)
G210707 NA non-coding downstream 15974 98786626 ~ 98787031 (-)
G210706 NA non-coding downstream 16545 98785611 ~ 98786460 (-)
G210665 NA non-coding downstream 17442 98784328 ~ 98785563 (-)
G210693 NA non-coding downstream 35310 98765404 ~ 98767695 (-)
G210694 NA non-coding downstream 48203 98745067 ~ 98754802 (-)
G210710 NA non-coding upstream 1459 98809799 ~ 98810003 (-)
G210656 NA non-coding upstream 27331 98835671 ~ 98841916 (-)
G210728 NA non-coding upstream 101596 98909936 ~ 98910293 (-)
G210730 NA non-coding upstream 124616 98932956 ~ 98955541 (-)
G210738 NA non-coding upstream 155411 98963751 ~ 98964109 (-)
LOC118936884 NA other downstream 657488 98127948 ~ 98145517 (-)
G209841 NA other downstream 1183793 97618859 ~ 97619212 (-)
G209802 NA other downstream 1300611 97501172 ~ 97502394 (-)
G209560 NA other downstream 1385817 97416821 ~ 97417188 (-)
G208658 NA other downstream 2380781 96421866 ~ 96422224 (-)
LOC118943885 LOC106561728 other upstream 110108 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 134134 98936783 ~ 98944041 (-)
G210765 NA other upstream 217392 99025732 ~ 99026118 (-)
G211127 NA other upstream 314893 99123233 ~ 99123658 (-)
LOC118936886 NA other upstream 807336 99615676 ~ 99619142 (-)

Expression


Co-expression Network