G104789


Basic Information

Item Value
gene id G104789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1250221 ~ 1252467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117880
TAATGTAGTGGGGTGGTCAGGAATTCAGTAGTGACTAATATAGTGGGGTGGTCAGGAATTCAGTAGTGACTAATGTAGTGGGGTGGTCAGGAATTCAGTAGTGACTAATATAGTGGGGTGGTCAGGAATTCAGTAGTGACTAATGTAGTGGGGTGGGCAGGAATTCAGTAGTGACTAATGTAGTGTGGTGGGCAGGAATTCAGTAGTGACTAATGTAGTGGGGTGGTCAGGAATTCAGTAGTGACTAATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117880 True 251 lncRNA 0.45 2 1250221 1252467

Neighbor

gene id symbol gene type direction distance location
rbms3 rbms3 coding upstream 18686 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 25317 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 280693 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 341645 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 377707 860459 ~ 872515 (+)
tgfbr2b LOC106606173 coding downstream 56735 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 171849 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 203869 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 317843 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 335715 1585657 ~ 1588650 (+)
G104702 NA non-coding upstream 16088 1233525 ~ 1234133 (+)
G104776 NA non-coding upstream 66503 1182336 ~ 1183718 (+)
G104771 NA non-coding upstream 76162 1173655 ~ 1174059 (+)
G104770 NA non-coding upstream 76693 1172408 ~ 1173528 (+)
G104756 NA non-coding upstream 110247 1139191 ~ 1139974 (+)
G104798 NA non-coding downstream 13989 1266456 ~ 1267051 (+)
G104894 NA non-coding downstream 19630 1272097 ~ 1272610 (+)
G104896 NA non-coding downstream 23565 1276032 ~ 1276273 (+)
G104911 NA non-coding downstream 49961 1302428 ~ 1303051 (+)
G104912 NA non-coding downstream 51169 1303636 ~ 1303911 (+)
G104761 NA other upstream 96472 1153061 ~ 1153749 (+)
G104092 NA other upstream 548950 690046 ~ 701271 (+)
G103851 NA other upstream 1069199 174996 ~ 181022 (+)
G105036 NA other downstream 446606 1699073 ~ 1700431 (+)
G105042 NA other downstream 456502 1708969 ~ 1710557 (+)
G106019 NA other downstream 1268249 2520716 ~ 2527972 (+)
G106122 NA other downstream 1465494 2717961 ~ 2718525 (+)

Expression


Co-expression Network