G104770


Basic Information

Item Value
gene id G104770
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1172408 ~ 1173528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117854
actcttgaccagagccctattccctatatcgtgcactactcttgaccagagccctattccctatatcgtgcactactcttgaccagagccctattccctatatcgtgcactactcttgaccagagccctattccctatatcgtgcactactcttgaccagagccctactccctatatcgtgcactactcttgaccagagccctattccctatatcgtgcactactcttgaccagaggtCTATGGGGAATATTTGGGACTCAATTGCTTGTCTTCAGCATTGCATGGTGGTCTTTTACCAAAGTGGCTTGTTCCATTATTCTCCTCAGAGGTGATTTAGTTCAATTATGACAGAGatgatttaattatattatgacagaggtgatttagttcaattatgacagaggtgatttagttcaattatgacagaggtgatttagttcaattatgacagaggtgatttagtt
>TU117852
tgaccagagccctattccctatatcgtgcactactcttgaccagagccctattccctatatcgtgcactactcttgaccagagccctattccctatatagtgcactactcttgaccagagccctactccctatatagtgcactactcttgaccagaggtCTATGGGGAATATTTGGGACTCAATTGCTTGTCTTCAGCATTGCATGGTGGTCTTTTACCAAAGTGGCTTGTTCCATTATTCTCCTCAGAGGTGATTTAGTTCAATTATGACAGAGATGATTTAGCTCTATGATGACAGAGATGATTTAGCTCTATGATGACAGAGATGAttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117854 False 465 lncRNA 0.39 3 1172408 1173528
TU117852 True 332 lncRNA 0.41 2 1172968 1173349

Neighbor

gene id symbol gene type direction distance location
LOC118936923 NA coding upstream 202880 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 263832 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 299894 860459 ~ 872515 (+)
LOC118937316 LOC106573240 coding upstream 446433 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 450015 714730 ~ 722393 (+)
LOC110515032 LOC106606177 coding downstream 48602 1222130 ~ 1224904 (+)
tgfbr2b LOC106606173 coding downstream 135674 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 250788 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 282808 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 396782 1570310 ~ 1573421 (+)
G104756 NA non-coding upstream 32434 1139191 ~ 1139974 (+)
G104746 NA non-coding upstream 61335 1110177 ~ 1111073 (+)
G104730 NA non-coding upstream 105189 1066580 ~ 1067219 (+)
G104722 NA non-coding upstream 124262 1047586 ~ 1048146 (+)
G104716 NA non-coding upstream 137642 1032044 ~ 1034766 (+)
G104771 NA non-coding downstream 127 1173655 ~ 1174059 (+)
G104776 NA non-coding downstream 8808 1182336 ~ 1183718 (+)
G104702 NA non-coding downstream 59997 1233525 ~ 1234133 (+)
G104789 NA non-coding downstream 76693 1250221 ~ 1252467 (+)
G104798 NA non-coding downstream 92928 1266456 ~ 1267051 (+)
G104761 NA other upstream 18659 1153061 ~ 1153749 (+)
G104092 NA other upstream 471137 690046 ~ 701271 (+)
G103851 NA other upstream 991386 174996 ~ 181022 (+)
G105036 NA other downstream 525545 1699073 ~ 1700431 (+)
G105042 NA other downstream 535441 1708969 ~ 1710557 (+)
G106019 NA other downstream 1347188 2520716 ~ 2527972 (+)
G106122 NA other downstream 1544433 2717961 ~ 2718525 (+)

Expression


Co-expression Network