G105700


Basic Information

Item Value
gene id G105700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2223199 ~ 2223419 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119301
caatttATTTTataccttgaatgagtaggtgttctcaaacttttgaccggtagtgtagctGATAATATGACACTCGAAATGTCTTTATCCTTTTGAAACCTTTATGAGTTTGATGTTGTTTTTTGTTTCTTCTCACTTTGTTTAaggtttatttcacttgctttggcaatgtaaacatatgcttCCCAGTCCATTAAAGTCacacttgaattgaattgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119301 True 221 lncRNA 0.33 1 2223199 2223419

Neighbor

gene id symbol gene type direction distance location
LOC118944029 NA coding upstream 45203 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 102744 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 321751 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 369629 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 428261 1745298 ~ 1794938 (+)
LOC118944030 NA coding downstream 194767 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 754817 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 755367 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 1183768 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1827364 4050783 ~ 4065607 (+)
G105694 NA non-coding upstream 9423 2212323 ~ 2213776 (+)
G105683 NA non-coding upstream 31910 2184048 ~ 2191289 (+)
G105673 NA non-coding upstream 60159 2161395 ~ 2163040 (+)
G105672 NA non-coding upstream 62170 2160815 ~ 2161029 (+)
G105670 NA non-coding upstream 62712 2159572 ~ 2160487 (+)
G105702 NA non-coding downstream 2299 2225718 ~ 2226088 (+)
G105704 NA non-coding downstream 4051 2227470 ~ 2227727 (+)
G105738 NA non-coding downstream 9384 2232803 ~ 2233739 (+)
G105740 NA non-coding downstream 10643 2234062 ~ 2235517 (+)
G105750 NA non-coding downstream 23190 2246609 ~ 2246849 (+)
G105042 NA other upstream 512642 1708969 ~ 1710557 (+)
G105036 NA other upstream 522768 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 870336 1309202 ~ 1390936 (+)
G104761 NA other upstream 1069450 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1350684 860459 ~ 872515 (+)
G106019 NA other downstream 297297 2520716 ~ 2527972 (+)
G106122 NA other downstream 494542 2717961 ~ 2718525 (+)
G106240 NA other downstream 751404 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 983378 3006312 ~ 3391033 (+)

Expression


Co-expression Network