G105738


Basic Information

Item Value
gene id G105738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2232803 ~ 2233739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119355
GATGGTGAGTCTATGTGTGGTCTTTCTATAACCCGCAGAGACATCACACATCACAGCTGATCCGCGGCATTCCTCGCCAGCCATGTCGGGTCCTTTCATCGTTCCACCCCTCAGGTTATATCTCCTTCCTCACACTGCTCAGCTGCTGCTGACACATTTTACTGGGCTTTCTCACCAGAACAGATATGTTGTACACAGGGAGGGGACTGCAAACACAGTGAGGATTATCACTCTGCCCCTGTATAACCCACTCTAGACAGCTAGAAGGACTCTGCCCCTGTATAACCCACTTCAGACAGCTAGAAGGACTCTGCCCCTGTATAACCCACTTCAGACAGCTAGAAGGACTCTGCCCCTGTATAACCCACTCTAGACAGCTAGAAGGAATCTGCCCCTGTATAACCCACTCTAGACAGCTAGAAGGACTCTGTCCCTGTATAACCCACTCTAGACAGCTAGAAGGAATCTGCCCCTG

Function

NR:

description
PREDICTED: hornerin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119355 True 475 lncRNA 0.53 2 2232803 2233739

Neighbor

gene id symbol gene type direction distance location
LOC118944029 NA coding upstream 54807 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 112348 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 331355 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 379233 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 437865 1745298 ~ 1794938 (+)
LOC118944030 NA coding downstream 184447 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 744497 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 745047 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 1173448 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1817044 4050783 ~ 4065607 (+)
G105704 NA non-coding upstream 5076 2227470 ~ 2227727 (+)
G105702 NA non-coding upstream 6715 2225718 ~ 2226088 (+)
G105700 NA non-coding upstream 9384 2223199 ~ 2223419 (+)
G105694 NA non-coding upstream 19027 2212323 ~ 2213776 (+)
G105683 NA non-coding upstream 41514 2184048 ~ 2191289 (+)
G105740 NA non-coding downstream 323 2234062 ~ 2235517 (+)
G105750 NA non-coding downstream 12870 2246609 ~ 2246849 (+)
G105752 NA non-coding downstream 14425 2248164 ~ 2248504 (+)
G105757 NA non-coding downstream 21009 2254748 ~ 2255015 (+)
G105760 NA non-coding downstream 22808 2256547 ~ 2256907 (+)
G105042 NA other upstream 522246 1708969 ~ 1710557 (+)
G105036 NA other upstream 532372 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 879940 1309202 ~ 1390936 (+)
G104761 NA other upstream 1079054 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1360288 860459 ~ 872515 (+)
G106019 NA other downstream 286977 2520716 ~ 2527972 (+)
G106122 NA other downstream 484222 2717961 ~ 2718525 (+)
G106240 NA other downstream 741084 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 973058 3006312 ~ 3391033 (+)

Expression


Co-expression Network