XLOC_020803


Basic Information

Item Value
gene id XLOC_020803
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 5977406 ~ 6009822 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042318
CGCGCATCTCGCAGACGTCAAATTGTACTTCCGCTCAATAACGACTATAAAACGGGTAAAACATCTCAAAATGTACGCGGGAATTCGATCAATTGTAGGTTTTTATTAGTAGCCAAGTACCAGTAAACACACAGAACACCTTagtacataaaatatcattaaagcTGTCCAGAATCAACGCCTCGGGAAGTTTGTATCCAGCACTAACGTGTTCAGGACTGCGGTAGAGATCCAGATGATCCCGACTATTGTAATACTGATCAGAgatccagcagcagcagcagcagaaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042318 True 290 lncRNA 0.43 2 5977406 6009822

Neighbor

gene id symbol gene type direction distance location
XLOC_020802 si:rp71-36a1.3 coding downstream 19340 5940398 ~ 5958066 (-)
XLOC_020801 si:rp71-36a1.2 coding downstream 43482 5923190 ~ 5933924 (-)
XLOC_020800 si:rp71-36a1.1 coding downstream 58099 5908556 ~ 5919307 (-)
XLOC_020799 BX005329.1 coding downstream 82778 5871035 ~ 5894628 (-)
XLOC_020798 NA coding downstream 105134 5860140 ~ 5872272 (-)
XLOC_020804 CU468041.2 coding upstream 16773 6026595 ~ 6054749 (-)
XLOC_020805 CU468041.1 coding upstream 34350 6044172 ~ 6046595 (-)
XLOC_020806 NA coding upstream 55048 6064870 ~ 6066867 (-)
XLOC_020807 si:dkey-19a16.2 coding upstream 63806 6073628 ~ 6082447 (-)
XLOC_020808 BX004840.1 coding upstream 75485 6085307 ~ 6087757 (-)
XLOC_020793 NA non-coding downstream 152207 5723328 ~ 5825199 (-)
XLOC_020795 BX005329.2 non-coding downstream 227956 5745303 ~ 5749450 (-)
XLOC_020792 NA non-coding downstream 253275 5701260 ~ 5724131 (-)
XLOC_020810 NA non-coding upstream 144853 6154675 ~ 6167952 (-)
XLOC_020811 BX004840.2 non-coding upstream 160549 6170371 ~ 6176259 (-)

Expression


Co-expression Network