G106864


Basic Information

Item Value
gene id G106864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4246739 ~ 4247242 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU121008
GAGAGATTTCCTGGacctgtccaataagaaatgctcattTTTTCGTTTTCCATTGCTAAGCATTTGGTGATGGTGTGCCCTAATTAATACTCCTCTGAGATTGGGGTTTTTCTGGGAACAGCCAGATCCTGCTTCTCTACAGTCTTCTGACATGACTTCTATCTGGTTGTCATTCATTAGGGAACTCAACAGGAAATGTTCTGTGTCAggttgttttgtttttctctaTGCAGATAGTCCCTGCCTGTTTCAAATGtggttttgttttgtttagtACCTAATGTTCTTCCATTTTAATGTAAAGAGAcaaatcctctgtctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121008 True 330 lncRNA 0.40 2 4246739 4247242

Neighbor

gene id symbol gene type direction distance location
LOC110507036 LOC106594376 coding upstream 126997 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 161059 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 181132 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 824640 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 1266546 2978786 ~ 2980193 (+)
col14a1a col14a1 coding downstream 80741 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 355716 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 387261 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 488415 4735246 ~ 4737284 (+)
LOC110506140 LOC106606110 coding downstream 900859 5148101 ~ 5176987 (+)
G106860 dscc1 non-coding upstream 14269 4227286 ~ 4232470 (+)
G106859 NA non-coding upstream 20170 4226264 ~ 4226569 (+)
G106857 NA non-coding upstream 22145 4224116 ~ 4224594 (+)
G106855 NA non-coding upstream 23608 4222458 ~ 4223131 (+)
G106852 NA non-coding upstream 24492 4221534 ~ 4222247 (+)
G106868 NA non-coding downstream 5675 4252917 ~ 4253177 (+)
G106869 NA non-coding downstream 6860 4254102 ~ 4254936 (+)
deptor deptor non-coding downstream 50645 4236880 ~ 4302536 (+)
G107580 NA non-coding downstream 58070 4305312 ~ 4305573 (+)
G107581 NA non-coding downstream 58467 4305709 ~ 4305999 (+)
G106814 NA other upstream 108243 4137813 ~ 4138496 (+)
G106775 NA other upstream 219145 4027075 ~ 4027594 (+)
G106575 NA other upstream 446387 3639434 ~ 3800352 (+)
G106595 NA other upstream 568889 3676265 ~ 3677850 (+)
G107922 NA other downstream 496926 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 561497 4808739 ~ 4811575 (+)
G108048 NA other downstream 610669 4857911 ~ 4858274 (+)
G108280 NA other downstream 889114 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 1048937 5296179 ~ 5299933 (+)

Expression


Co-expression Network