G107612


Basic Information

Item Value
gene id G107612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4353241 ~ 4353525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122158
CTGTTTATCAtagtgactgggagagagaccaCTCACCTAACCCAGTGTCCACTGTTTATCAtagtgactgggagagagaccaCTCACCTAACCCAGTGTCCACTGTTTATCAtagtgactgggagagagaccaCTCACCTAACCCAGTGTCCACTGTTTATCAtagtgactgggagagagaccaTTCTCCTAACCCAGTGTCCACTGTTTATCAtagtgactgggagagagaccaCTCACCTAACCCAGTGTCCACTGTTTATCAtagtgactgggagagagacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122158 True 285 lncRNA 0.48 1 4353241 4353525

Neighbor

gene id symbol gene type direction distance location
deptor deptor coding upstream 50705 4236880 ~ 4302536 (+)
LOC110507036 LOC106594376 coding upstream 233499 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 267561 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 287634 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 931142 3350582 ~ 3487129 (+)
LOC110520696 mtbp coding downstream 249433 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 280978 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 382132 4735246 ~ 4737284 (+)
LOC110506140 LOC106606110 coding downstream 794576 5148101 ~ 5176987 (+)
tbc1d31 tbc1d31 coding downstream 842406 5195931 ~ 5227041 (+)
G107611 NA non-coding upstream 4079 4348867 ~ 4349162 (+)
G107582 NA non-coding upstream 46666 4306188 ~ 4306575 (+)
G107581 NA non-coding upstream 47242 4305709 ~ 4305999 (+)
G107580 NA non-coding upstream 47668 4305312 ~ 4305573 (+)
G107613 NA non-coding downstream 59 4353584 ~ 4353832 (+)
G107614 NA non-coding downstream 1504 4355029 ~ 4355288 (+)
G107618 NA non-coding downstream 10946 4364471 ~ 4364708 (+)
G107625 NA non-coding downstream 25333 4378858 ~ 4379314 (+)
G107627 NA non-coding downstream 29073 4382598 ~ 4383867 (+)
G106814 NA other upstream 214745 4137813 ~ 4138496 (+)
G106775 NA other upstream 325647 4027075 ~ 4027594 (+)
G106575 NA other upstream 552889 3639434 ~ 3800352 (+)
G106595 NA other upstream 675391 3676265 ~ 3677850 (+)
G107922 NA other downstream 390643 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 455214 4808739 ~ 4811575 (+)
G108048 NA other downstream 504386 4857911 ~ 4858274 (+)
G108280 NA other downstream 782831 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 942654 5296179 ~ 5299933 (+)

Expression


Co-expression Network