G108876


Basic Information

Item Value
gene id G108876
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6281550 ~ 6281898 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123871
TGCATCAAACTGAGCATCTATCTGACAACCAAATAGTCATTTATTCACAAGTCATCACAAATACAACATAACTTACACAGAGGGTTAACCAATTAGCATCCCAAAATGCATCAAACTGAGCATCTATCTGACAACCAAATAGTCATTTATTCACAAGTCATCACAAATACAACATAACTTACACAGAGGGTTAACCAATTAGCATCCCAAAATCAATGCACAATCCTCCAACTAGTATGGAATATCATTTTATTGGTTgggtacacatatttagcagatattaATGTGGTTGTAGTGAAGagcttgtgttcctagttccaacagtggagtaatatctaacaatacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123871 True 349 lncRNA 0.35 1 6281550 6281898

Neighbor

gene id symbol gene type direction distance location
ccdc12 ccd12 coding upstream 31508 6231369 ~ 6250042 (+)
LOC118937376 NA coding upstream 187610 6092079 ~ 6093940 (+)
setd2 LOC106593284 coding upstream 232049 6002992 ~ 6049501 (+)
LOC110505679 LOC106579367 coding upstream 279285 5976200 ~ 6002265 (+)
cep72 LOC106573558 coding downstream 4660 6286558 ~ 6312599 (+)
trip13 LOC106590995 coding downstream 96475 6378373 ~ 6389788 (+)
nkd2b LOC106574162 coding downstream 120778 6402676 ~ 6499698 (+)
zgc:158766 LOC106590969 coding downstream 263470 6545368 ~ 6629469 (+)
LOC118937387 NA coding downstream 337212 6619110 ~ 6621596 (+)
G108872 NA non-coding upstream 1511 6279261 ~ 6280039 (+)
G108861 NA non-coding upstream 15068 6265941 ~ 6266482 (+)
G108845 NA non-coding upstream 52197 6229118 ~ 6229353 (+)
G108844 NA non-coding upstream 52803 6228409 ~ 6228747 (+)
G108843 NA non-coding upstream 53364 6227700 ~ 6228186 (+)
G108873 NA non-coding downstream 32701 6314599 ~ 6318260 (+)
G108887 NA non-coding downstream 50131 6332029 ~ 6333259 (+)
G108888 NA non-coding downstream 52199 6334097 ~ 6344523 (+)
G108897 NA non-coding downstream 81006 6362904 ~ 6364789 (+)
G108911 NA non-coding downstream 104432 6386330 ~ 6386720 (+)
G108805 LOC106594197 other upstream 82209 6151712 ~ 6199341 (+)
G108775 LOC106606109 other upstream 223215 6056996 ~ 6058335 (+)
LOC110505637 LOC106573538 other upstream 322737 5953886 ~ 5958813 (+)
G108733 NA other upstream 380600 5900511 ~ 5900950 (+)
G108874 LOC106573552 other downstream 173 6282071 ~ 6285940 (+)
G109020 NA other downstream 351180 6633078 ~ 6633913 (+)
rbm24b LOC106596654 other downstream 574188 6855864 ~ 6868976 (+)
malsu1 malsu1 other downstream 626649 6908511 ~ 6911256 (+)
LOC110535156 LOC106606167 other downstream 659618 6941465 ~ 6944043 (+)

Expression


Co-expression Network