G112438


Basic Information

Item Value
gene id G112438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10086449 ~ 10176197 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128360
tctataacagtttggtctggtgagaggagagacatctatactagtctggtctggtgagagacatctatactagtctggtctggtgggaggagagacatctataatagtctggtgagaggagagacatctatactagtctggtctggtgagaggagagacatctataatagtctggtctgatgagaggagagacatctataatagtctgatgagaggagagacatctataatagtctggtgagaggagagacatctatactagtctggtctggtgagaggagagacatctataatagtctggtctgatgagaggagagacatctataatagtctgatgagaggagagacatctataatagtctggtctggtgagaggagagacatctataatagtctggtctgatgagaggagagacatctataatagtctgatgagaggagagacatctataatagtctggtctgatgagaggagagacatctataatagtctggtgagaggagagacatctataatagtctggtctggtgagaggagagacatctataatagtctggtctggtgagaggagagacatctataatagtctggtgagaggagagacatctataatagtctggtgagaggagagacatctataatagtctggtgagaggagagacatctataatagtctgatgagaggagagacatctatactagtctggtctggtgagaggagagacatctataatagtctggtctgatgagaggagagacatctataatagtctggtgagaggagagacatctataatagtc

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128360 True 802 lncRNA 0.54 2 10086449 10176197

Neighbor

gene id symbol gene type direction distance location
LOC110493960 LOC106606059 coding downstream 79639 10000730 ~ 10007883 (-)
LOC110507310 LOC106595913 coding downstream 173118 9910470 ~ 9913331 (-)
LOC118937662 NA coding downstream 239592 9846044 ~ 9847233 (-)
LOC110512181 LOC106605978 coding downstream 682956 9392946 ~ 9403493 (-)
LOC110520732 LOC106605979 coding downstream 737144 9330271 ~ 9349305 (-)
LOC110507454 LOC106584706 coding upstream 86123 10262320 ~ 10267649 (-)
LOC110507471 LOC106584706 coding upstream 124508 10300705 ~ 10309293 (-)
LOC118944052 NA coding upstream 140581 10316778 ~ 10354245 (-)
LOC110520767 ulk4 coding upstream 225722 10400640 ~ 10611447 (-)
ccka cck-l coding upstream 539108 10715305 ~ 10718380 (-)
G112440 NA non-coding downstream 1702 10083108 ~ 10084747 (-)
G112437 NA non-coding downstream 8249 10077714 ~ 10078200 (-)
G112413 LOC106606032 non-coding downstream 11557 10069149 ~ 10074892 (-)
G112415 NA non-coding downstream 23891 10062186 ~ 10062558 (-)
G112429 NA non-coding downstream 28476 10057617 ~ 10057973 (-)
G112490 NA non-coding upstream 4857 10181054 ~ 10211523 (-)
G112491 LOC106584755 non-coding upstream 7950 10184147 ~ 10296999 (-)
G112496 NA non-coding upstream 10179 10186376 ~ 10294295 (-)
G112492 NA non-coding upstream 59423 10235620 ~ 10294178 (-)
G112532 NA non-coding upstream 82682 10258879 ~ 10280539 (-)
G112076 LOC105018850 other downstream 305994 9779011 ~ 9780455 (-)
G112066 NA other downstream 324784 9761300 ~ 9761665 (-)
G111955 NA other downstream 451319 9634537 ~ 9635130 (-)
G111855 NA other downstream 646511 9439362 ~ 9439938 (-)
G112567 NA other upstream 170274 10346471 ~ 10346935 (-)
G112928 NA other upstream 394245 10570442 ~ 10570808 (-)
G112965 NA other upstream 472068 10648265 ~ 10718658 (-)
eif3h LOC100196680 other upstream 560532 10736729 ~ 10808244 (-)

Expression


Co-expression Network