G116689


Basic Information

Item Value
gene id G116689
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15437750 ~ 15442972 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU134196
CTCTagtgcagacacacaaacacacaccttagCTCTGGAGGAGCGGACATTCTCCATGCTCTCAATGCTGTGGATGCAGTTGGGAGAGACTTTACTGCAGGCTGCTTTCACATAATCCCAGAAACTACGATGAGTCTCATAACCAAACCACGTAGTCTGacctgggaggagggagggggaggagggagatggaagagagagagctaCATTTATAGGTGGCATATTGACTCCTATACCCAGCAACCCTGCAGTGGTCCAGATGGGACGGGCTTttagcacgtgtgtgtgtgttactctacCTTTGAGTCTGTGACTGAGGATCTGTTCCAGGATGGAGACGAAGTTGGTGAACTCCGGAGAGGAGTCGTCTATCGTGTCTAAACAGGAGCGGTCAAGCAACGTCTTCACTGaaaCCTGCAGACAGTCAGTAGATTCCTCCTCTCCACAGCTCCGCTTCTGGCAGCGTCCTGTTTGCGAGCTACATGCAGCCCCAGGCTACGTGACGCCATCCTCGCCACAGTTAGTCGTATCTCCCCAGTGTAGGTGCGCAGTATTTGCTGTCCCTGTTTCTTTTAAATCAGCAGGTTGGGTTCAACAGTGCACGCCACCGCCCGCGGGCTCTATCCGCGTCACTCCAGCACGCTCGCTCGTTTGTTGAAAGTCAACGTATAGGGCAAGAAGGAGGTGGATGGATGAACAGAAACCACCCAGTAATTTGGGAGAGAAACAGTCACGGGGTTGTGCTAAAACGCCCAAACCAAGTCCCGGGAAGTCTGAGCGGTTTAAATTCCTGTTTAGAGCGAATTAGGC

Function

NR:

description
RUN domain-containing protein 3B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134196 True 810 TUCP 0.49 2 15437750 15442972

Neighbor

gene id symbol gene type direction distance location
abcb4 LOC106574611 coding downstream 5838 15402707 ~ 15431912 (-)
LOC110535793 rpp38 coding downstream 61193 15327195 ~ 15376557 (-)
LOC118937754 NA coding downstream 133062 15295302 ~ 15304688 (-)
trnat-ugu-27 NA coding downstream 183599 15254079 ~ 15254151 (-)
trnat-ugu-26 NA coding downstream 187226 15250452 ~ 15250524 (-)
LOC110535857 LOC106576048 coding upstream 8918 15451890 ~ 15466958 (-)
LOC110535882 cld12 coding upstream 144827 15587799 ~ 15591702 (-)
LOC110535873 gtpbp10 coding upstream 171351 15614323 ~ 15617489 (-)
nbn LOC106575260 coding upstream 191342 15634314 ~ 15650474 (-)
LOC110535911 LOC106595606 coding upstream 225235 15668207 ~ 15671859 (-)
G116688 NA non-coding downstream 179 15437353 ~ 15437571 (-)
G116628 NA non-coding downstream 35551 15348821 ~ 15402199 (-)
G116639 NA non-coding downstream 99972 15337460 ~ 15337778 (-)
G116619 NA non-coding downstream 129962 15307323 ~ 15307788 (-)
G116714 NA non-coding upstream 58127 15501099 ~ 15501608 (-)
G116773 NA non-coding upstream 153065 15596037 ~ 15597919 (-)
G116785 NA non-coding upstream 174913 15617885 ~ 15620664 (-)
G116787 NA non-coding upstream 178804 15621776 ~ 15622016 (-)
G116790 NA non-coding upstream 183228 15626200 ~ 15626576 (-)
G116620 fam171a1 other downstream 125150 15308899 ~ 15312600 (-)
G116613 NA other downstream 142938 15294413 ~ 15294812 (-)
G116125 NA other downstream 352811 15084627 ~ 15084939 (-)
LOC110507888 LOC106570745 other downstream 433078 14981044 ~ 15004730 (-)
G116023 NA other downstream 551262 14885139 ~ 14886488 (-)
G116835 LOC100194679 other upstream 332353 15775325 ~ 15787415 (-)
LOC110536013 NA other upstream 336008 15778980 ~ 15857764 (-)
LOC110518702 atp8b2 other upstream 473261 15898225 ~ 15982097 (-)
LOC110534219 LOC106575505 other upstream 655600 16079813 ~ 16108032 (-)

Expression


Co-expression Network