Gene
RNA
| Item | Value |
|---|---|
| gene id | G116619 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 15307323 ~ 15307788 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein FAM171A1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU134100 | True | 466 | lncRNA | 0.48 | 1 | 15307323 | 15307788 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937754 | NA | coding | downstream | 2635 | 15295302 ~ 15304688 (-) |
| trnat-ugu-27 | NA | coding | downstream | 53172 | 15254079 ~ 15254151 (-) |
| trnat-ugu-26 | NA | coding | downstream | 56799 | 15250452 ~ 15250524 (-) |
| trnat-ugu-25 | NA | coding | downstream | 59025 | 15248226 ~ 15248298 (-) |
| trnat-ugu-24 | NA | coding | downstream | 61251 | 15246000 ~ 15246072 (-) |
| LOC110535793 | rpp38 | coding | upstream | 19407 | 15327195 ~ 15376557 (-) |
| abcb4 | LOC106574611 | coding | upstream | 94919 | 15402707 ~ 15431912 (-) |
| LOC110535857 | LOC106576048 | coding | upstream | 144102 | 15451890 ~ 15466958 (-) |
| LOC110535882 | cld12 | coding | upstream | 280011 | 15587799 ~ 15591702 (-) |
| LOC110535873 | gtpbp10 | coding | upstream | 306535 | 15614323 ~ 15617489 (-) |
| G116617 | NA | non-coding | downstream | 1349 | 15305674 ~ 15305974 (-) |
| G116616 | NA | non-coding | downstream | 1751 | 15305138 ~ 15305572 (-) |
| G116611 | NA | non-coding | downstream | 14475 | 15292585 ~ 15292848 (-) |
| G116609 | NA | non-coding | downstream | 16917 | 15289609 ~ 15290406 (-) |
| G116607 | NA | non-coding | downstream | 21370 | 15285677 ~ 15285953 (-) |
| G116639 | NA | non-coding | upstream | 29672 | 15337460 ~ 15337778 (-) |
| G116628 | NA | non-coding | upstream | 41033 | 15348821 ~ 15402199 (-) |
| G116688 | NA | non-coding | upstream | 129565 | 15437353 ~ 15437571 (-) |
| G116714 | NA | non-coding | upstream | 193311 | 15501099 ~ 15501608 (-) |
| G116613 | NA | other | downstream | 12511 | 15294413 ~ 15294812 (-) |
| G116125 | NA | other | downstream | 222384 | 15084627 ~ 15084939 (-) |
| LOC110507888 | LOC106570745 | other | downstream | 302651 | 14981044 ~ 15004730 (-) |
| G116023 | NA | other | downstream | 420835 | 14885139 ~ 14886488 (-) |
| rbm12ba | LOC106605943 | other | downstream | 436605 | 14867830 ~ 14870776 (-) |
| G116620 | fam171a1 | other | upstream | 1111 | 15308899 ~ 15312600 (-) |
| G116689 | NA | other | upstream | 129962 | 15437750 ~ 15442972 (-) |
| LOC110535911 | LOC106595606 | other | upstream | 360445 | 15668207 ~ 15671859 (-) |
| G116835 | LOC100194679 | other | upstream | 467537 | 15775325 ~ 15787415 (-) |
| LOC110536013 | NA | other | upstream | 471192 | 15778980 ~ 15857764 (-) |
