Gene
RNA
| Item | Value |
|---|---|
| gene id | G123242 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22854889 ~ 22855131 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C-type lectin domain family 4 member E-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142372 | True | 243 | lncRNA | 0.48 | 1 | 22854889 | 22855131 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534486 | NA | coding | downstream | 1043 | 22853130 ~ 22853846 (-) |
| LOC118936533 | LOC106605595 | coding | downstream | 4039 | 22847803 ~ 22850850 (-) |
| LOC118938551 | LOC106605594 | coding | downstream | 9408 | 22839988 ~ 22845481 (-) |
| LOC110538050 | LOC106605593 | coding | downstream | 16381 | 22822697 ~ 22838508 (-) |
| LOC110538006 | LOC106605591 | coding | downstream | 41754 | 22803447 ~ 22813135 (-) |
| LOC110538076 | LOC106578103 | coding | upstream | 9811 | 22864942 ~ 22882936 (-) |
| im:7147486 | LOC106605599 | coding | upstream | 28847 | 22883978 ~ 22899520 (-) |
| LOC110538037 | LOC106605599 | coding | upstream | 51955 | 22907086 ~ 22949770 (-) |
| si:dkeyp-84f3.5 | LOC106605600 | coding | upstream | 98450 | 22953581 ~ 22965449 (-) |
| LOC110538268 | LOC106605601 | coding | upstream | 112920 | 22968051 ~ 22971540 (-) |
| G123240 | NA | non-coding | downstream | 8426 | 22845750 ~ 22846463 (-) |
| G123234 | NA | non-coding | downstream | 15353 | 22838771 ~ 22839536 (-) |
| G123241 | NA | non-coding | downstream | 33073 | 22820600 ~ 22821816 (-) |
| G123268 | NA | non-coding | downstream | 36609 | 22818066 ~ 22818280 (-) |
| G123277 | LOC106605579 | non-coding | upstream | 5094 | 22860225 ~ 22863254 (-) |
| G123281 | NA | non-coding | upstream | 21104 | 22876235 ~ 22877073 (-) |
| G123283 | NA | non-coding | upstream | 34601 | 22889732 ~ 22889979 (-) |
| G123296 | NA | non-coding | upstream | 63197 | 22918328 ~ 22918547 (-) |
| G123299 | NA | non-coding | upstream | 68063 | 22923194 ~ 22923601 (-) |
| G122972 | NA | other | downstream | 476729 | 22376153 ~ 22378160 (-) |
| LOC110537842 | NA | other | downstream | 697355 | 22120579 ~ 22157534 (-) |
| G122829 | LOC106605673 | other | downstream | 827172 | 22026299 ~ 22027717 (-) |
| G122761 | LOC106578847 | other | downstream | 998988 | 21851433 ~ 21856413 (-) |
| G122733 | LOC106592382 | other | downstream | 1042457 | 21796507 ~ 21812432 (-) |
| G123308 | NA | other | upstream | 149855 | 23004986 ~ 23005812 (-) |
| G123435 | NA | other | upstream | 330509 | 23185640 ~ 23199252 (-) |
| LOC110538355 | LOC106577931 | other | upstream | 425048 | 23279116 ~ 23281851 (-) |
| G124840 | NA | other | upstream | 1048708 | 23903839 ~ 23904677 (-) |
| LOC110538705 | LOC106577653 | other | upstream | 1304036 | 24144519 ~ 24172836 (-) |
