Gene
RNA
| Item | Value |
|---|---|
| gene id | G135861 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 34895279 ~ 34895499 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU156435 | True | 221 | lncRNA | 0.56 | 1 | 34895279 | 34895499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| arl4aa | LOC106605206 | coding | upstream | 200075 | 34692610 ~ 34695204 (+) |
| si:dkey-30e9.6 | LOC106605205 | coding | upstream | 202993 | 34687955 ~ 34692286 (+) |
| vwde | LOC106605201 | coding | upstream | 248502 | 34644435 ~ 34646777 (+) |
| LOC110488146 | tmem106b | coding | upstream | 260305 | 34626361 ~ 34634974 (+) |
| LOC110488114 | LOC106582161 | coding | upstream | 430686 | 34432779 ~ 34464593 (+) |
| LOC110488257 | LOC106605215 | coding | downstream | 65872 | 34961371 ~ 34964552 (+) |
| LOC110488281 | apom | coding | downstream | 89449 | 34984948 ~ 35000555 (+) |
| lt-b2 | lt-b2 | coding | downstream | 109081 | 35004580 ~ 35009706 (+) |
| tnf-alpha | tnf-alpha | coding | downstream | 127508 | 35023007 ~ 35025008 (+) |
| LOC110533739 | ppt2a | coding | downstream | 227304 | 35122803 ~ 35127514 (+) |
| G135685 | NA | non-coding | upstream | 138099 | 34756631 ~ 34757180 (+) |
| G135671 | NA | non-coding | upstream | 156785 | 34738282 ~ 34738494 (+) |
| G135380 | thsd7a | non-coding | upstream | 339914 | 34554573 ~ 34555365 (+) |
| G135341 | LOC106582184 | non-coding | upstream | 383566 | 34510480 ~ 34511713 (+) |
| G135316 | NA | non-coding | upstream | 425081 | 34468889 ~ 34470198 (+) |
| G135865 | NA | non-coding | downstream | 6061 | 34901560 ~ 34901780 (+) |
| G135873 | NA | non-coding | downstream | 18227 | 34913726 ~ 34914891 (+) |
| G135913 | NA | non-coding | downstream | 56640 | 34952139 ~ 34952511 (+) |
| G135914 | NA | non-coding | downstream | 57018 | 34952517 ~ 34952855 (+) |
| G135907 | NA | non-coding | downstream | 57580 | 34953079 ~ 34953420 (+) |
| G134735 | LOC100136012 | other | upstream | 932621 | 33962417 ~ 33962658 (+) |
| G133760 | LOC106605274 | other | upstream | 1080796 | 33814033 ~ 33814483 (+) |
| G133663 | LOC106605282 | other | upstream | 1397994 | 33496454 ~ 33497285 (+) |
| G133473 | LOC106605294 | other | upstream | 1725901 | 33167438 ~ 33169378 (+) |
| G135916 | NA | other | downstream | 76141 | 34971640 ~ 34971931 (+) |
| G135920 | LOC106605214 | other | downstream | 76950 | 34972449 ~ 34972801 (+) |
| lypc | LOC106584559 | other | downstream | 256261 | 35151760 ~ 35153650 (+) |
| LOC110488391 | LOC106582385 | other | downstream | 285180 | 35180650 ~ 35184002 (+) |
