G139256


Basic Information

Item Value
gene id G139256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37773682 ~ 37774184 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU160152
CAATGTGAACATACCATAGAACTACAAAAATAGAATACAATTAAATTAATTAAATCAAAACAAGCACAACTTGTAAATATCAAATATGGATCAATGTGATGTGTCAATATGCATGTCCATTATGCAGGTCCCTAAGGTCAATATTACAAAACGTTCAGAAAACCATTCTCTTTGTGTTTAACACTATGATCAGCAATTATGTTGTGAATTGCGTTAAACCCATGCTAAAGGCAAGACATGTCCTTCTGTACTGAGGTGACAGCAGTAAATAAGTATTAACTGCTTAGAGTTAATGCTAAATGTGGTGACAGAGAGACACTGTATATTGTAATGAATAAAAAAAGGGAATCAAGATCAAATGAAtactcacatactgtatgtgatgacttatttgtttttaattcattcagattaaAAAAGGTCCAAATGATCACACACAAAATAATTCTCAACAGAACACATTGTACATAACATTTTCTACACTAGGAACAACATCTTAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160152 True 503 lncRNA 0.31 1 37773682 37774184

Neighbor

gene id symbol gene type direction distance location
LOC118939571 NA coding downstream 296920 37463985 ~ 37476762 (-)
LOC110501508 LOC106605132 coding downstream 309843 37442359 ~ 37463839 (-)
LOC110488968 LOC106605134 coding downstream 436075 37332647 ~ 37337607 (-)
LOC110533765 NA coding downstream 500707 37264176 ~ 37272975 (-)
LOC110488943 LOC106582967 coding downstream 847800 36922102 ~ 36925882 (-)
LOC110489008 LOC106604987 coding upstream 3220 37777404 ~ 37782182 (-)
LOC118939581 LOC106604987 coding upstream 17055 37791239 ~ 37796388 (-)
LOC118939584 c3-1 coding upstream 30825 37805009 ~ 37806792 (-)
LOC110489018 LOC106597357 coding upstream 32575 37806759 ~ 37810055 (-)
LOC110489027 c3-1 coding upstream 43930 37818114 ~ 37823518 (-)
G139243 NA non-coding downstream 9969 37762548 ~ 37763713 (-)
G139000 LOC105030512 non-coding downstream 76329 37697059 ~ 37697353 (-)
G138979 NA non-coding downstream 91311 37682067 ~ 37682371 (-)
G138978 NA non-coding downstream 92000 37681368 ~ 37681682 (-)
G138968 NA non-coding downstream 105784 37667638 ~ 37667898 (-)
G139310 NA non-coding upstream 128410 37902594 ~ 37906515 (-)
G139309 LOC106605124 non-coding upstream 132766 37906950 ~ 37911825 (-)
G139333 NA non-coding upstream 173575 37947759 ~ 37948117 (-)
LOC110489074 LOC106605123 non-coding upstream 196115 37920689 ~ 38000324 (-)
LOC110489088 LOC106583156 non-coding upstream 228877 38003059 ~ 38029406 (-)
G139231 NA other downstream 20724 37747441 ~ 37752958 (-)
pnrc2 LOC106605140 other downstream 924337 36844929 ~ 36849373 (-)
G138080 NA other downstream 945285 36825792 ~ 36828397 (-)
G137839 LOC106605146 other downstream 1134677 36634193 ~ 36639005 (-)
LOC110489105 LOC106605178 other upstream 272518 38046700 ~ 38048666 (-)
G140479 NA other upstream 1053725 38827909 ~ 38828195 (-)
G140879 NA other upstream 1289678 39063862 ~ 39064418 (-)
G141363 LOC106605077 other upstream 1989749 39763933 ~ 39765473 (-)
LOC110489653 LOC106605072 other upstream 2450438 40224622 ~ 40298333 (-)

Expression


Co-expression Network