XLOC_021157 (BX005398.2)



Basic Information


Item Value
gene id XLOC_021157
gene name BX005398.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 23757955 ~ 23758641 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00041541
TGAAATTTGTAAGTTTACATCAATCTATTAGGTGGAAAGGGTCGTCCCAGAAGGAAAAACTATTTTCAGAGCTGGAGAAAGTGTGACAGTCGCCTGCACTGAAAAAACTTGGTTTAGTTCAAAAGAAACCAGCAAAACATTTACATGTCAAGATGATGGGCAGTGGGACTCTTATCCTGGTTGTGAAGTGATTACATGTGAATCTCCACCTATACAGCATGTATCCACCTACTTTTGGAGGACGATGAAACTGGAAGAAACAAAATATCTTATAACTGTGATTCTGGTTATTATAAGAAGGCAGAAGTGGGCACATGGACACGAGATGGACTGACACGAAAACCCCTGTATATCCCCGAAATCGTCTGTGCAGCTCCTGATCTGCCAAATGCAAAAATCACAAGAGGTCTAAAATCAAAGTACAAACTCAATTCAGCAATACAATATCAATGTCCCCCAGGATTTGAACCACATGGCACTGTACAAATCACCTGTTTGTCCTCGGGTCAATGGTCAGACATACAGCAATGCACTGG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104597

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00041541 True 536 processed_transcript 0.41 3 23757955 23758641

Neighbor


gene id symbol gene type direction distance location
XLOC_021156 BX005398.1 coding downstream 3540 23752586 ~ 23754415 (-)
XLOC_021155 cfhl2 coding downstream 9671 23734001 ~ 23748284 (-)
XLOC_021154 cfhl1 coding downstream 51184 23693195 ~ 23706771 (-)
XLOC_021153 cfh coding downstream 89487 23641801 ~ 23668468 (-)
XLOC_021152 cfhl4 coding downstream 132583 23598036 ~ 23625372 (-)
XLOC_021158 cfhl3 coding upstream 8916 23767557 ~ 23781213 (-)
XLOC_021159 AL935303.1 coding upstream 210439 23969080 ~ 23969709 (-)
XLOC_021160 NA coding upstream 315448 24074089 ~ 24076285 (-)
XLOC_021161 NA coding upstream 430497 24189138 ~ 24195658 (-)
XLOC_021162 rgs2 coding upstream 487572 24246213 ~ 24248420 (-)
XLOC_021151 NA non-coding downstream 160994 23593057 ~ 23596961 (-)
XLOC_021149 CR388178.3 non-coding downstream 261026 23496815 ~ 23496929 (-)
XLOC_021143 BX936380.2 non-coding downstream 813370 22944461 ~ 22944585 (-)
XLOC_021142 NA non-coding downstream 896457 22825425 ~ 22861498 (-)
XLOC_021163 BX649608.1 non-coding upstream 491546 24250187 ~ 24250995 (-)
XLOC_021169 dre-mir-725 non-coding upstream 607552 24366193 ~ 24366272 (-)

Expression



Co-expression Network